Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 SNORA60-201ENST00000362396 134 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 RHOT1P2-201ENST00000366423 333 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AL590704.1-201ENST00000402856 794 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 RNA5SP104-201ENST00000410989 118 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AL390879.2-203ENST00000426943 1121 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC093422.3-201ENST00000428506 305 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 ELOCP6-201ENST00000429066 328 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 DNAJC19P8-201ENST00000452887 259 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 ELOCP12-201ENST00000458706 328 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC104689.1-201ENST00000473356 768 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 RPS4XP15-201ENST00000489210 795 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC025445.1-201ENST00000502728 300 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC025554.1-201ENST00000505641 188 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC104108.1-201ENST00000509930 412 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC104229.1-201ENST00000561364 255 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 RPL23AP87-202ENST00000573039 466 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC107982.3-201ENST00000584957 985 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC245100.7-201ENST00000609678 442 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 AC017104.5-201ENST00000637647 639 ntBASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
NPIPA1Q9UND3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 ERCC6-202ENST00000374127 1782 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC016716.1-201ENST00000265882 708 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 SNORD35B-201ENST00000363660 87 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 SNORD74.4-201ENST00000364129 80 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 RNU6-1293P-201ENST00000384077 107 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 RNA5SP171-201ENST00000391071 115 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AL451062.2-201ENST00000427515 271 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC008065.1-201ENST00000428525 348 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 RRM2P4-201ENST00000441721 562 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC004865.1-201ENST00000442276 1003 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 VN1R34P-201ENST00000447387 883 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 MTND2P31-201ENST00000512602 616 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 FTH1P9-201ENST00000513251 355 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 ATP5F1P7-201ENST00000567330 760 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC106734.1-201ENST00000568646 663 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC025627.2-201ENST00000576220 160 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC012417.1-201ENST00000582307 1039 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 MIR5684-201ENST00000585074 65 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 CCDC58P3-201ENST00000590792 430 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC068790.5-201ENST00000602741 355 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC104662.1-201ENST00000604448 511 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC012603.1-201ENST00000606424 528 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 MIR6864-201ENST00000617935 70 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 FRG1HP-204ENST00000617940 757 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 RNU6-156P-201ENST00000621869 107 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 OR8B1P-202ENST00000641132 1178 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 NOL8P1-201ENST00000508336 3529 ntBASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.69□□□□□ -1.82
NPIPA1Q9UND3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NPIPA1Q9UND3 AC008725.1-201ENST00000605123 2263 ntBASIC3.68□□□□□ -1.82
NPIPA1Q9UND3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPIPA1Q9UND3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NPIPA1Q9UND3 AC010733.2-201ENST00000589496 5702 ntBASIC3.68□□□□□ -1.82
NPIPA1Q9UND3 RNU6-1339P-201ENST00000363574 91 ntBASIC3.68□□□□□ -1.82
NPIPA1Q9UND3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.68□□□□□ -1.82
NPIPA1Q9UND3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPIPA1Q9UND3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms