Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 MIR423-201ENST00000362201 94 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 MIR199A2-201ENST00000385289 110 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 MTND4P24-201ENST00000424002 397 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 ZFAND6P1-201ENST00000434138 605 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 KCTD9P3-201ENST00000434597 1169 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC091564.1-201ENST00000464563 479 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC023050.1-201ENST00000498198 304 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AL109741.3-201ENST00000561748 592 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC009101.1-201ENST00000568135 242 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 MIR548Y-201ENST00000582739 110 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 CBX3P2-202ENST00000583365 535 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 NF1P5-201ENST00000588287 448 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC055764.2-201ENST00000610089 670 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AP004607.9-201ENST00000618202 316 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AP003072.4-201ENST00000624580 310 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 AC009501.3-201ENST00000605001 1352 ntBASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLIP2Q9UDT6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 ZNF285B-201ENST00000561698 1767 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 SAGE2P-201ENST00000420011 2126 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AL589826.1-201ENST00000340697 249 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 SNORD3H-201ENST00000384486 214 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 FAM204CP-201ENST00000424489 642 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 RPS24P8-201ENST00000431490 402 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 RPS17P13-201ENST00000448974 407 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AL133162.1-201ENST00000463228 453 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC087385.1-201ENST00000475062 312 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 SNORA70.14-201ENST00000516205 110 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 PAICSP4-201ENST00000517543 1253 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AL161713.1-201ENST00000555538 145 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC115621.1-201ENST00000604653 858 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC110792.4-201ENST00000609843 298 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC003001.2-201ENST00000616294 831 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC004943.3-201ENST00000624116 600 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 AC100871.1-201ENST00000507871 1456 ntBASIC4.48□□□□□ -1.69
CLIP2Q9UDT6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC006504.1-201ENST00000562493 3666 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 RNU6-452P-201ENST00000384406 107 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 VN1R34P-201ENST00000447387 883 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 UBDP1-202ENST00000457888 382 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC093663.2-201ENST00000484625 313 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC004069.2-201ENST00000505438 1114 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 RNU1-95P-201ENST00000516357 160 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 RNA5SP309-201ENST00000516670 106 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 RNU1-128P-201ENST00000516704 160 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC007991.1-201ENST00000522680 631 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms