Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NDE1Q9NXR1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL021368.2-201ENST00000606125 5352 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 IGKV7-3-201ENST00000357453 298 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 RNU1-14P-201ENST00000362759 152 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL645927.1-201ENST00000396783 406 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 DNAJC19P6-201ENST00000401853 280 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 HLFP1-201ENST00000402375 499 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL133270.1-201ENST00000402635 279 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 SSR1P2-201ENST00000415208 787 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 TMSB10P2-201ENST00000416049 131 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 P2RY10P2-201ENST00000416730 913 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 GTF2IP3-201ENST00000433887 494 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 BMS1P19-201ENST00000433925 393 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 HMGB1P45-201ENST00000435986 653 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 RPL23AP52-201ENST00000439311 478 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC092170.1-201ENST00000440211 356 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 MTND1P26-201ENST00000440488 538 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC005002.1-201ENST00000447458 540 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 MTCO3P35-201ENST00000485582 781 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC111193.1-201ENST00000504097 155 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 NDUFB5P1-201ENST00000508134 564 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC008837.1-201ENST00000511513 412 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 HMGB1P23-201ENST00000518743 568 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 SMARCE1P4-201ENST00000523647 241 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 NDUFS5P6-201ENST00000529136 295 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 HIGD1AP5-201ENST00000529959 259 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 TOMM20P2-201ENST00000540082 421 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC068714.1-201ENST00000559623 800 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 Mico1.1-201ENST00000611698 204 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 AC006386.1-201ENST00000619436 415 ntBASIC3.89□□□□□ -1.79
NDE1Q9NXR1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
NDE1Q9NXR1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 MFSD8-220ENST00000641243 1422 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 SNORA60-201ENST00000362396 134 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 SNORD35B-201ENST00000363660 87 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RN7SKP103-201ENST00000363848 320 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 SNORA70F-201ENST00000384142 135 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RNU6-906P-201ENST00000384700 70 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 Y_RNA.578-201ENST00000390903 88 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 ANAPC10P1-201ENST00000395991 556 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RN7SKP235-201ENST00000410662 305 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RPL23AP26-201ENST00000412728 464 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 MTATP6P20-201ENST00000414147 562 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 RPL23AP27-201ENST00000415161 451 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC048351.1-201ENST00000420064 602 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 C1DP1-201ENST00000426049 402 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 MTND2P5-201ENST00000432656 1006 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 USP9YP7-201ENST00000436723 430 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.88□□□□□ -1.79
NDE1Q9NXR1 AC073648.4-201ENST00000442655 781 ntBASIC3.88□□□□□ -1.79
NDE1Q9NXR1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms