Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.44□□□□□ -1.54
VTA1Q9NP79 LTV1P1-201ENST00000510683 1237 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 HMGB3P13-201ENST00000511263 607 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 RFPL4AP5-201ENST00000514977 504 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 RNU1-6P-201ENST00000516290 144 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VTA1Q9NP79 MTCYBP20-201ENST00000524239 1129 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC009643.1-201ENST00000532030 391 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC007115.1-201ENST00000546853 234 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 AL390334.1-201ENST00000556395 450 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC012435.1-202ENST00000568772 240 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.44□□□□□ -1.54
VTA1Q9NP79 MIR5699-201ENST00000578903 90 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 SNORA74C-1-201ENST00000580726 201 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC008759.1-201ENST00000589783 983 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC093765.1-201ENST00000603758 881 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 MTCYBP22-201ENST00000603788 447 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC012360.2-201ENST00000609349 391 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC018816.2-201ENST00000621460 353 ntBASIC5.44□□□□□ -1.54
VTA1Q9NP79 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTA1Q9NP79 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTA1Q9NP79 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.44□□□□□ -1.54
VTA1Q9NP79 AC025574.1-201ENST00000554784 1653 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AL451142.2-201ENST00000429076 2090 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AL672167.1-206ENST00000356293 943 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 RNU4-91P-201ENST00000364778 135 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 Y_RNA.302-201ENST00000364997 102 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 MIR129-1-201ENST00000384972 72 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AL133384.1-201ENST00000412744 351 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 ATG4AP1-201ENST00000416893 538 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 AL645608.4-201ENST00000423619 154 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 SDCBPP2-201ENST00000424643 885 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 RPL23AP1-201ENST00000428990 471 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 PRPF38AP1-201ENST00000451976 933 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 PPIAP21-201ENST00000464473 501 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 FTH1P2-201ENST00000466086 412 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 AC090013.1-201ENST00000485147 480 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 SNX5P1-201ENST00000505757 1041 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 Y_RNA.695-201ENST00000516715 107 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AC008802.1-201ENST00000519121 791 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AP003033.1-201ENST00000527244 415 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AC024560.3-201ENST00000608482 349 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 MIR6758-201ENST00000620653 63 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 AP001005.3-201ENST00000622049 129 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 AL442639.1-201ENST00000625030 1899 ntBASIC5.43□□□□□ -1.54
VTA1Q9NP79 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.43□□□□□ -1.54
VTA1Q9NP79 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTA1Q9NP79 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VTA1Q9NP79 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 RPL32P3-201ENST00000359025 275 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 RNU6-462P-201ENST00000362659 105 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 RNA5SP88-201ENST00000365560 109 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 RNA5SP397-201ENST00000391323 118 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 RPL23AP29-201ENST00000397284 453 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 AL078604.1-201ENST00000404609 466 ntBASIC5.42□□□□□ -1.54
VTA1Q9NP79 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VTA1Q9NP79 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms