Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC005326.1-201ENST00000429197 123 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 BX679664.1-201ENST00000434429 253 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AC243772.1-201ENST00000451620 410 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 RN7SL594P-201ENST00000470590 287 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 IGKV2D-23-201ENST00000518179 286 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 KCTD9P6-201ENST00000522306 950 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 HMGB3P26-201ENST00000560051 582 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AC106785.3-201ENST00000564064 847 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 CKS1BP3-201ENST00000600888 237 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AC073657.2-201ENST00000605661 303 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 PHKBP1-201ENST00000450951 1951 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 CEP170P1-201ENST00000502249 4587 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 AL513302.2-201ENST00000562313 1842 ntBASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KIAA1549Q9HCM3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 MIR128-1-201ENST00000384921 82 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC091390.3-201ENST00000426478 338 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 RN7SL601P-201ENST00000471221 293 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 CAB39P1-201ENST00000502277 460 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC105227.2-201ENST00000615075 605 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC026422.1-201ENST00000623961 452 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC092435.3-201ENST00000565538 3654 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 NMD3P1-201ENST00000439704 1488 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AP002088.1-201ENST00000382740 395 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 RPS6P12-201ENST00000432491 726 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 DUX4L52-201ENST00000549363 777 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 CYP2C60P-201ENST00000566088 139 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AF131215.7-201ENST00000602443 707 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 AC079880.2-201ENST00000603790 1213 ntBASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.05□□□□□ -1.92
KIAA1549Q9HCM3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 ASNSP1-201ENST00000518311 1939 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 HSPA8P19-201ENST00000505359 1517 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 MIR30E-201ENST00000362104 92 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 RPL5P19-201ENST00000404228 893 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 RN7SKP56-201ENST00000410513 331 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 RNA5SP31-201ENST00000411144 127 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 Z92545.1-201ENST00000411782 234 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AC093698.1-201ENST00000423843 571 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 RWDD4P2-201ENST00000426392 563 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 EXTL2P1-201ENST00000446218 416 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AL671855.1-201ENST00000446875 1203 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 RWDD4P1-201ENST00000488019 565 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 RNU2-27P-201ENST00000516185 142 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AL121766.1-201ENST00000547436 487 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AC008507.1-201ENST00000587506 734 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AC004825.2-201ENST00000616634 455 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AF117829.1-206ENST00000621883 3802 ntBASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KIAA1549Q9HCM3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms