Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 HMGB3P6-201ENST00000444896 598 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 MTCYBP3-201ENST00000445588 1137 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 PHBP16-201ENST00000446318 950 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 ISCUP1-201ENST00000454451 448 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 RPL7P32-201ENST00000457119 744 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AL133477.1-201ENST00000457472 514 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC107015.1-201ENST00000466902 747 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 MTCO1P35-201ENST00000515270 228 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 IGHV3-63-201ENST00000518422 341 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC007224.1-201ENST00000564410 144 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC095057.3-201ENST00000567102 1157 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 MTND4LP24-201ENST00000572277 291 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 IPO5P1-202ENST00000600039 287 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AL020997.3-201ENST00000602843 359 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AL590229.1-201ENST00000603497 542 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC020634.1-201ENST00000608701 549 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 FRG1HP-204ENST00000617940 757 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AP004607.9-201ENST00000618202 316 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AL445567.2-201ENST00000618935 498 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC073569.3-201ENST00000619055 682 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC079248.2-201ENST00000623779 326 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC010608.2-201ENST00000624830 470 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC055839.1-201ENST00000634467 498 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 AC090017.1-201ENST00000548612 1779 ntBASIC4.67□□□□□ -1.66
EBF3Q9H4W6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.67□□□□□ -1.66
EBF3Q9H4W6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC009951.1-201ENST00000623674 2614 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 RNU1-130P-201ENST00000363930 160 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 SNORD116.1-201ENST00000365628 92 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 RNU6-224P-201ENST00000384055 107 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 Y_RNA.578-201ENST00000390903 88 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 ATP5F1P3-201ENST00000397213 657 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AL121834.1-202ENST00000404494 277 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 SNRPFP1-201ENST00000414761 252 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 IFNNP1-201ENST00000429219 553 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC098826.1-201ENST00000433943 471 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 PPIAP13-201ENST00000434706 478 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 RPS3AP54-201ENST00000435535 734 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC009961.3-201ENST00000449832 765 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AL591363.1-201ENST00000450091 483 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC244505.3-201ENST00000454598 187 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 NECAP1P2-201ENST00000455668 727 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 RN7SL98P-201ENST00000462271 300 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC108475.1-201ENST00000507880 950 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 RNU6-1308P-201ENST00000516817 103 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 MTCYBP41-201ENST00000528913 1123 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 PDCL2P2-201ENST00000533651 189 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 PSMB7P1-201ENST00000556349 514 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 BNIP3P5-201ENST00000562290 498 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 DPRXP5-201ENST00000604662 539 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 RN7SKP299-201ENST00000606679 301 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC023043.4-201ENST00000612081 449 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AC099842.1-201ENST00000619919 596 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 AL359715.5-201ENST00000623431 443 ntBASIC4.66□□□□□ -1.66
EBF3Q9H4W6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.66□□□□□ -1.66
EBF3Q9H4W6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.65□□□□□ -1.66
EBF3Q9H4W6 RLIMP2-201ENST00000427891 1563 ntBASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms