Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 MTCYBP45-201ENST00000435243 565 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC073465.2-201ENST00000440938 498 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 PTMAP3-201ENST00000447474 330 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC099563.1-201ENST00000456086 418 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 RPL37P6-202ENST00000464216 403 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 RN7SL188P-201ENST00000469842 285 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 DUTP1-201ENST00000493631 470 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC008638.1-201ENST00000506035 866 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC091133.4-201ENST00000511142 308 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC093677.1-201ENST00000514414 678 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 RN7SKP244-201ENST00000516513 307 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 RNU6-506P-201ENST00000516553 94 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 RNU6-714P-201ENST00000516963 103 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 CYCSP22-201ENST00000517555 339 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AP003122.4-201ENST00000530980 758 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AL157394.1-201ENST00000562983 1224 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC010547.6-201ENST00000571789 193 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AL161729.4-201ENST00000604650 476 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AL022154.1-201ENST00000604698 785 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AL136131.3-201ENST00000607600 188 ntBASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM55Q9BYV6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC095050.2-201ENST00000510748 1458 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 MIR375-201ENST00000362103 64 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 RPS3AP36-201ENST00000398190 775 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC069213.2-201ENST00000420238 366 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC093155.2-201ENST00000420734 937 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 EIF1P1-201ENST00000421436 341 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 GAPDHP17-201ENST00000449858 1001 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AP001992.1-205ENST00000462248 379 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 OR5M14P-201ENST00000506803 618 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 DUTP7-201ENST00000507982 486 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 SNORA70.20-201ENST00000516848 126 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 DEFB108A-201ENST00000530110 222 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 TPRKBP2-201ENST00000565969 475 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 OR4G1P-201ENST00000588632 938 ntBASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM55Q9BYV6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms