Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC137768.1-201ENST00000549998 553 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 KPNA2P3-201ENST00000584190 848 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC008507.1-201ENST00000587506 734 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC073544.2-201ENST00000601155 540 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC104785.1-201ENST00000603220 588 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 BNIP3P11-201ENST00000603878 563 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC090425.2-201ENST00000608818 501 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 MIR6729-201ENST00000618194 65 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC018816.2-201ENST00000621460 353 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 LINC01739-205ENST00000641890 573 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 MTND5P28-201ENST00000438005 1594 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 AC104118.1-201ENST00000607625 1589 ntBASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM54Q9BYV2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC027290.2-201ENST00000623210 18662 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 RNU6-462P-201ENST00000362659 105 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 Y_RNA.194-201ENST00000363985 102 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 RN7SKP273-201ENST00000411392 314 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 RPL12P46-201ENST00000436610 195 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 ATP5C1P1-201ENST00000441945 895 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 NDUFA12P1-201ENST00000455914 406 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 RN7SL517P-201ENST00000462240 305 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AP000942.1-201ENST00000463969 747 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 RPS4XP15-201ENST00000489210 795 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC005726.1-201ENST00000494679 427 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 MTCYBP28-201ENST00000566728 1132 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 MIR4716-201ENST00000579628 84 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC011477.5-201ENST00000586571 259 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC006116.3-201ENST00000592968 361 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC104687.2-201ENST00000604442 342 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AL031775.1-201ENST00000607014 887 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC012360.2-201ENST00000609349 391 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC078899.5-201ENST00000612475 178 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC015908.5-201ENST00000623289 343 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC090582.1-201ENST00000636321 199 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 DDX43P2-201ENST00000604753 1354 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 AC007529.1-201ENST00000418574 2178 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 SMG1P6-201ENST00000532337 2930 ntBASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.85□□□□□ -1.63
TRIM54Q9BYV2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 AL450326.2-201ENST00000421913 1962 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 CR383658.2-201ENST00000547576 1525 ntBASIC4.84□□□□□ -1.63
TRIM54Q9BYV2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms