Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL596276.1-201ENST00000434465 418 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC093156.1-201ENST00000440382 670 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 RAC1P7-201ENST00000445367 377 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 MTND1P12-201ENST00000455231 147 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 UBDP1-202ENST00000457888 382 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC079382.1-201ENST00000493346 557 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC008945.1-201ENST00000505144 499 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 FAM92A1P1-201ENST00000528023 890 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 COX6CP3-201ENST00000580869 223 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 MIR3176-201ENST00000582210 90 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC063977.5-201ENST00000601044 974 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC012507.3-201ENST00000603556 477 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 RN7SL787P-201ENST00000613000 284 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AL139099.4-201ENST00000614802 114 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AL359880.1-201ENST00000621879 266 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AC026951.1-201ENST00000559530 2459 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 AL355834.1-201ENST00000556602 3965 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 MTCO1P11-201ENST00000429111 1528 ntBASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TRAIPQ9BWF2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RNU5E-1-201ENST00000362477 120 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RNY4P16-201ENST00000364768 94 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 Y_RNA.554-201ENST00000384672 102 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RNU11-4P-201ENST00000391149 133 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 CYB5AP4-201ENST00000396692 399 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RNU2-47P-201ENST00000410649 186 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 MTCO2P29-201ENST00000465212 189 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 MTAPP1-201ENST00000489154 819 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 MTCO3P24-201ENST00000572729 782 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 SNORA59B-202ENST00000578183 701 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 UBE2L4-201ENST00000587688 464 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 TUG1_1.1-201ENST00000610654 145 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RN7SL544P-201ENST00000617232 284 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AC090527.3-201ENST00000619041 548 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RN7SL763P-201ENST00000620922 284 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AL161637.1-201ENST00000622380 412 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AL158801.5-201ENST00000623123 465 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 AP006248.2-201ENST00000623309 592 ntBASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRAIPQ9BWF2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC015799.1-201ENST00000622996 3122 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 AC009951.1-201ENST00000623674 2614 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 SNORA64.1-201ENST00000362600 132 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 SNORD115-47-201ENST00000391226 86 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 MTND3P17-201ENST00000416968 344 ntBASIC6.43□□□□□ -1.38
TRAIPQ9BWF2 CCDC58P2-201ENST00000417131 366 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms