Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.23□□□□□ -1.57
SIN3AQ96ST3 RPL7P55-201ENST00000450522 746 ntBASIC5.23□□□□□ -1.57
SIN3AQ96ST3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 AC005726.1-201ENST00000494679 427 ntBASIC5.23□□□□□ -1.57
SIN3AQ96ST3 AC133963.2-201ENST00000513686 578 ntBASIC5.23□□□□□ -1.57
SIN3AQ96ST3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 AL121766.1-201ENST00000547436 487 ntBASIC5.23□□□□□ -1.57
SIN3AQ96ST3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 AC016597.2-201ENST00000613256 341 ntBASIC5.23□□□□□ -1.57
SIN3AQ96ST3 RMST_9.1-201ENST00000619945 193 ntBASIC5.23□□□□□ -1.57
SIN3AQ96ST3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SIN3AQ96ST3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 RNU4-7P-201ENST00000364758 141 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 RNU6-1005P-201ENST00000384519 107 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 Z95327.1-201ENST00000446082 482 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 RPS3AP46-201ENST00000448352 682 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC106707.2-201ENST00000484182 374 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC107398.1-201ENST00000486904 505 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 OR5H3P-201ENST00000502817 919 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 RNU6-1308P-201ENST00000516817 103 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 RANP9-201ENST00000519957 271 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC109635.6-201ENST00000525487 1113 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC133552.5-201ENST00000604266 540 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AL158050.2-201ENST00000605336 568 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC007275.1-201ENST00000621243 671 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AL732618.1-201ENST00000623251 301 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.22□□□□□ -1.57
SIN3AQ96ST3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SIN3AQ96ST3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
SIN3AQ96ST3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC090337.1-201ENST00000579651 2074 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 RNU6-354P-201ENST00000383862 107 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 RNU6-610P-201ENST00000384264 107 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 MIR122-201ENST00000385044 85 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 RNU2-17P-201ENST00000410290 190 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 XKRYP4-201ENST00000414395 483 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC023512.1-201ENST00000444513 499 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 XKRYP5-201ENST00000449659 483 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC008379.1-201ENST00000463655 464 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AP006245.1-201ENST00000522549 120 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC084373.1-201ENST00000603311 235 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 SUMO2P14-201ENST00000604488 293 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AL355816.2-201ENST00000610049 647 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC008759.3-201ENST00000613300 508 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC022960.3-201ENST00000619794 441 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC010608.3-201ENST00000625048 527 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC004808.1-201ENST00000627671 721 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SIN3AQ96ST3 AC008432.1-201ENST00000615912 1320 ntBASIC5.21□□□□□ -1.58
SIN3AQ96ST3 MTND5P11-201ENST00000511037 1812 ntBASIC5.2□□□□□ -1.58
SIN3AQ96ST3 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.2□□□□□ -1.58
SIN3AQ96ST3 HMGB1P10-201ENST00000395823 563 ntBASIC5.2□□□□□ -1.58
SIN3AQ96ST3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.2□□□□□ -1.58
SIN3AQ96ST3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.2□□□□□ -1.58
SIN3AQ96ST3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.2□□□□□ -1.58
SIN3AQ96ST3 AC013262.1-201ENST00000426710 252 ntBASIC5.2□□□□□ -1.58
SIN3AQ96ST3 RPL37P1-201ENST00000432310 284 ntBASIC5.2□□□□□ -1.58
SIN3AQ96ST3 AC006994.1-201ENST00000438212 839 ntBASIC5.2□□□□□ -1.58
SIN3AQ96ST3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.2□□□□□ -1.58
SIN3AQ96ST3 AC099563.1-201ENST00000456086 418 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms