Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 RPL23AP23-201ENST00000452590 471 ntBASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 AC025181.1-201ENST00000477507 416 ntBASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 UBL5P2-201ENST00000583788 219 ntBASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 AC099063.3-201ENST00000642066 185 ntBASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 RPS20P22-201ENST00000473700 357 ntBASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 ELOCP29-201ENST00000588193 334 ntBASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 SNORA7.4-201ENST00000384249 137 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 MIR184-201ENST00000384962 84 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 MIR1289-2-201ENST00000408360 111 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 GNG5P5-201ENST00000420444 220 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC011270.1-201ENST00000558606 583 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 DEFB122-202ENST00000569013 197 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 MRPS35P3-201ENST00000603189 709 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC011266.1-201ENST00000624119 3569 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AL672167.1-206ENST00000356293 943 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 MIR93-201ENST00000385024 80 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 RNA5SP146-201ENST00000410743 123 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC007563.3-201ENST00000433233 371 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 RPSAP41-201ENST00000439695 860 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 SEPT14P1-201ENST00000458703 648 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC018552.3-201ENST00000567416 561 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 FAM35DP-201ENST00000323387 2712 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 FAM133CP-201ENST00000332869 704 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 RAP1BP1-201ENST00000412709 553 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AL009174.1-201ENST00000426577 416 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 NPM1P39-201ENST00000449818 867 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC005229.2-201ENST00000456995 399 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AL139174.1-201ENST00000531489 886 ntBASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.72□□□□□ -1.97
CSMD1Q96PZ7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
CSMD1Q96PZ7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.71□□□□□ -1.97
CSMD1Q96PZ7 MIR764-201ENST00000390811 85 ntBASIC2.71□□□□□ -1.97
CSMD1Q96PZ7 AC017037.1-201ENST00000508460 471 ntBASIC2.71□□□□□ -1.97
CSMD1Q96PZ7 LINC02471-203ENST00000641941 4752 ntBASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 SNORD74.4-201ENST00000364129 80 ntBASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 RPL5P30-201ENST00000465511 891 ntBASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 OR4R3P-201ENST00000525084 838 ntBASIC2.71□□□□□ -1.98
CSMD1Q96PZ7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms