Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.73□□□□□ -1.65
USP47Q96K76 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.73□□□□□ -1.65
USP47Q96K76 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.73□□□□□ -1.65
USP47Q96K76 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USP47Q96K76 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.73□□□□□ -1.65
USP47Q96K76 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.73□□□□□ -1.65
USP47Q96K76 AC115989.2-201ENST00000578640 563 ntBASIC4.73□□□□□ -1.65
USP47Q96K76 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.73□□□□□ -1.65
USP47Q96K76 AC015911.5-201ENST00000587076 451 ntBASIC4.73□□□□□ -1.65
USP47Q96K76 YPEL5P2-201ENST00000605553 359 ntBASIC4.73□□□□□ -1.65
USP47Q96K76 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.72□□□□□ -1.65
USP47Q96K76 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP47Q96K76 RNU6-1263P-201ENST00000384601 106 ntBASIC4.72□□□□□ -1.65
USP47Q96K76 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.72□□□□□ -1.65
USP47Q96K76 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.72□□□□□ -1.65
USP47Q96K76 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.72□□□□□ -1.65
USP47Q96K76 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.72□□□□□ -1.65
USP47Q96K76 AC008264.1-201ENST00000447612 367 ntBASIC4.72□□□□□ -1.65
USP47Q96K76 AL121877.1-201ENST00000453704 622 ntBASIC4.72□□□□□ -1.65
USP47Q96K76 MIR2276-201ENST00000516886 89 ntBASIC4.72□□□□□ -1.65
USP47Q96K76 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.72□□□□□ -1.65
USP47Q96K76 AC107934.2-201ENST00000518653 310 ntBASIC4.72□□□□□ -1.65
USP47Q96K76 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.72□□□□□ -1.65
USP47Q96K76 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.72□□□□□ -1.65
USP47Q96K76 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.72□□□□□ -1.65
USP47Q96K76 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.72□□□□□ -1.65
USP47Q96K76 AL354976.1-201ENST00000613843 387 ntBASIC4.72□□□□□ -1.65
USP47Q96K76 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.72□□□□□ -1.65
USP47Q96K76 AC007529.1-201ENST00000418574 2178 ntBASIC4.72□□□□□ -1.65
USP47Q96K76 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP47Q96K76 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.72□□□□□ -1.65
USP47Q96K76 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP47Q96K76 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.71□□□□□ -1.66
USP47Q96K76 RNU6-1320P-201ENST00000390838 107 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 U3.19-201ENST00000390893 196 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 RNU6-1269P-201ENST00000391139 107 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.71□□□□□ -1.66
USP47Q96K76 AC126124.2-201ENST00000413542 321 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.71□□□□□ -1.66
USP47Q96K76 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.71□□□□□ -1.66
USP47Q96K76 AL512649.1-201ENST00000428997 581 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 RNU6-599P-201ENST00000459383 107 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 RNU6-1193P-201ENST00000459461 107 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 AP001486.1-201ENST00000463339 476 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 AC073522.1-201ENST00000483312 377 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.71□□□□□ -1.66
USP47Q96K76 ARL2BPP6-201ENST00000512757 439 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 RN7SKP289-201ENST00000517244 295 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 AC090136.1-201ENST00000520009 240 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 AC024224.1-201ENST00000538284 609 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.71□□□□□ -1.66
USP47Q96K76 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.71□□□□□ -1.66
USP47Q96K76 RNU6-368P-201ENST00000620928 107 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 RNU6-538P-201ENST00000622329 107 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
USP47Q96K76 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP47Q96K76 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
USP47Q96K76 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
USP47Q96K76 CR383658.2-201ENST00000547576 1525 ntBASIC4.71□□□□□ -1.66
USP47Q96K76 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP47Q96K76 MIR30E-201ENST00000362104 92 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP47Q96K76 AL513174.1-201ENST00000423182 629 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 MTCO1P51-201ENST00000427672 1060 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.7□□□□□ -1.66
USP47Q96K76 MTCYBP14-201ENST00000457471 715 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 TRBV8-2-201ENST00000475637 270 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 AC113430.1-201ENST00000506872 718 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
USP47Q96K76 AC021146.1-201ENST00000511202 716 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.7□□□□□ -1.66
USP47Q96K76 SNORD116-30-201ENST00000516468 85 ntBASIC4.7□□□□□ -1.66
USP47Q96K76 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.7□□□□□ -1.66
USP47Q96K76 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.7□□□□□ -1.66
USP47Q96K76 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.7□□□□□ -1.66
USP47Q96K76 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
USP47Q96K76 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
USP47Q96K76 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.7□□□□□ -1.66
USP47Q96K76 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
USP47Q96K76 TTC39DP-201ENST00000416781 1688 ntBASIC4.69□□□□□ -1.66
USP47Q96K76 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.69□□□□□ -1.66
USP47Q96K76 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP47Q96K76 SNORA48.5-201ENST00000391143 135 ntBASIC4.69□□□□□ -1.66
USP47Q96K76 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.69□□□□□ -1.66
USP47Q96K76 AC063979.1-201ENST00000415539 377 ntBASIC4.69□□□□□ -1.66
USP47Q96K76 RPF2P1-201ENST00000424137 906 ntBASIC4.69□□□□□ -1.66
USP47Q96K76 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.69□□□□□ -1.66
USP47Q96K76 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.69□□□□□ -1.66
USP47Q96K76 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.69□□□□□ -1.66
USP47Q96K76 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.69□□□□□ -1.66
USP47Q96K76 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.69□□□□□ -1.66
USP47Q96K76 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.69□□□□□ -1.66
USP47Q96K76 AL137843.1-201ENST00000605078 385 ntBASIC4.69□□□□□ -1.66
USP47Q96K76 RNVU1-4-201ENST00000612985 164 ntBASIC4.69□□□□□ -1.66
USP47Q96K76 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
USP47Q96K76 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.69□□□□□ -1.66
USP47Q96K76 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP47Q96K76 AL031985.3-201ENST00000565390 2449 ntBASIC4.69□□□□□ -1.66
USP47Q96K76 TNPO1P3-201ENST00000436471 2662 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms