Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC107075.1-201ENST00000613695 314 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC068724.3-201ENST00000625906 87 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC140479.6-201ENST00000633535 357 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 OR8B1P-202ENST00000641132 1178 ntBASIC4.38□□□□□ -1.71
RTP4Q96DX8 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RTP4Q96DX8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.38□□□□□ -1.71
RTP4Q96DX8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTP4Q96DX8 EIF2AP4-201ENST00000424793 1781 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC006042.3-201ENST00000454684 1469 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTP4Q96DX8 RNA5SP479-201ENST00000364858 117 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 SNORD116-9-201ENST00000384000 95 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 RNU4-31P-201ENST00000384211 141 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 SNORD116-3-201ENST00000384287 95 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 SNORD116-7-201ENST00000384404 95 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 SNORD116-5-201ENST00000384462 95 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 MIR1179-201ENST00000408703 91 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 RN7SKP222-201ENST00000410651 315 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 RNA5SP498-201ENST00000411342 120 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 VTA1P1-201ENST00000414044 866 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 Z75741.2-201ENST00000417272 1167 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AL593851.1-201ENST00000426171 157 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AL390023.1-201ENST00000428836 262 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 MTND1P20-201ENST00000430341 950 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 HMGB1P45-201ENST00000435986 653 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 RPL23AP52-201ENST00000439311 478 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 FHP1-201ENST00000442741 703 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AL512326.1-201ENST00000443050 721 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 RAD23BP3-201ENST00000454157 1152 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC006517.1-201ENST00000480485 328 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC069528.1-202ENST00000482888 637 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 PRELID3BP4-201ENST00000515476 571 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 RNA5SP73-201ENST00000516744 108 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 snoZ278.1-201ENST00000517059 112 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 HMGB1P1-201ENST00000522557 636 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AL390334.1-201ENST00000556395 450 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 MIR3939-201ENST00000582614 106 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTP4Q96DX8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC233280.2-201ENST00000603917 1070 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC080013.3-201ENST00000606839 578 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 OR2AS2P-201ENST00000606902 342 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AL592148.2-201ENST00000612210 372 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC011939.3-201ENST00000613686 466 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AL603755.1-201ENST00000619504 163 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 MIR7702-201ENST00000621931 59 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 OR1S1-201ENST00000624470 978 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 AC024023.1-201ENST00000624530 922 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTP4Q96DX8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 BTBD10P1-201ENST00000549824 1352 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 DDX43P2-201ENST00000604753 1354 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RTP4Q96DX8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.37□□□□□ -1.71
RTP4Q96DX8 CASC19-284ENST00000642142 1868 ntBASIC4.37□□□□□ -1.71
RTP4Q96DX8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RTP4Q96DX8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTP4Q96DX8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTP4Q96DX8 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTP4Q96DX8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RTP4Q96DX8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTP4Q96DX8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTP4Q96DX8 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RTP4Q96DX8 RNA5SP388-201ENST00000362584 119 ntBASIC4.36□□□□□ -1.71
RTP4Q96DX8 MIR320B1-201ENST00000390209 79 ntBASIC4.36□□□□□ -1.71
RTP4Q96DX8 OR6C69P-201ENST00000394268 893 ntBASIC4.36□□□□□ -1.71
RTP4Q96DX8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTP4Q96DX8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.36□□□□□ -1.71
RTP4Q96DX8 SEPT2P1-201ENST00000419651 180 ntBASIC4.36□□□□□ -1.71
RTP4Q96DX8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.36□□□□□ -1.71
RTP4Q96DX8 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.36□□□□□ -1.71
RTP4Q96DX8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms