Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 RN7SKP46-201ENST00000515942 234 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.22□□□□□ -1.57
HPS3Q969F9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.22□□□□□ -1.57
HPS3Q969F9 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.22□□□□□ -1.57
HPS3Q969F9 BGLT3-201ENST00000564523 994 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.22□□□□□ -1.57
HPS3Q969F9 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.22□□□□□ -1.57
HPS3Q969F9 NBR2-204ENST00000587322 63 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 AL590229.1-201ENST00000603497 542 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC069304.2-201ENST00000605154 435 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC022106.2-201ENST00000620114 757 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC015908.5-201ENST00000623289 343 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 AC068137.4-201ENST00000638485 296 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HPS3Q969F9 AC090971.4-201ENST00000560291 1800 ntBASIC5.22□□□□□ -1.57
HPS3Q969F9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
HPS3Q969F9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HPS3Q969F9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.22□□□□□ -1.57
HPS3Q969F9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.57
HPS3Q969F9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HPS3Q969F9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.21□□□□□ -1.58
HPS3Q969F9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HPS3Q969F9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.21□□□□□ -1.58
HPS3Q969F9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.21□□□□□ -1.58
HPS3Q969F9 AL158073.1-201ENST00000426848 1104 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AL590103.1-201ENST00000434488 307 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 NMNAT1P2-201ENST00000435192 860 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS3Q969F9 MTCYBP39-201ENST00000437562 491 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 OR1H1P-201ENST00000448731 937 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.21□□□□□ -1.58
HPS3Q969F9 SLC31A1P1-201ENST00000451221 567 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 RPS5P7-201ENST00000456664 608 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AC112206.1-201ENST00000468416 477 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AC108751.2-201ENST00000469993 231 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 RPS29P22-201ENST00000472363 168 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.21□□□□□ -1.58
HPS3Q969F9 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 RNU2-30P-201ENST00000516209 141 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 RN7SKP276-201ENST00000516242 268 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS3Q969F9 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS3Q969F9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS3Q969F9 AC090502.2-201ENST00000549267 280 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.21□□□□□ -1.58
HPS3Q969F9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.21□□□□□ -1.58
HPS3Q969F9 MIR3934-201ENST00000579806 107 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AC011477.5-201ENST00000586571 259 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.21□□□□□ -1.58
HPS3Q969F9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 VN1R92P-201ENST00000598511 928 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AC073091.2-201ENST00000603205 907 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 MIR6864-201ENST00000617935 70 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 FP325313.1-201ENST00000638228 703 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.21□□□□□ -1.58
HPS3Q969F9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HPS3Q969F9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HPS3Q969F9 AC107068.1-201ENST00000563286 4218 ntBASIC5.21□□□□□ -1.58
HPS3Q969F9 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 Z98755.1-201ENST00000407015 1384 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
HPS3Q969F9 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HPS3Q969F9 OR4A15-201ENST00000314706 1035 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 RNU6-441P-201ENST00000384545 106 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 Y_RNA.560-201ENST00000384689 102 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 ATP5F1P4-201ENST00000397288 746 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC073264.1-201ENST00000411508 416 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.2□□□□□ -1.58
HPS3Q969F9 AC012519.1-201ENST00000424588 610 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 SDCBPP2-201ENST00000424643 885 ntBASIC5.2□□□□□ -1.58
HPS3Q969F9 AC234779.1-201ENST00000425910 285 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms