Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPS27AP17-201ENST00000463344 455 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 RN7SL583P-201ENST00000475692 287 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 RN7SL727P-201ENST00000482164 296 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 TOMM22P4-201ENST00000511318 336 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC034159.1-201ENST00000513885 583 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 SCOCP1-201ENST00000554676 349 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 SUB1P2-201ENST00000556401 297 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 CKS1BP3-201ENST00000600888 237 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC009027.1-201ENST00000604510 479 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC097468.3-201ENST00000607956 456 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC090607.5-201ENST00000615692 224 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AP000473.2-201ENST00000602659 1537 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 MTCO1P14-201ENST00000441695 1559 ntBASIC5.93□□□□□ -1.46
SHKBP1Q8TBC3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 MTND5P33-201ENST00000571250 1450 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 SNORA22B-201ENST00000383876 138 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 SNORA69-201ENST00000383895 132 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 MT-TG-201ENST00000387429 68 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 SNORD115.1-201ENST00000391109 76 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AL034403.1-201ENST00000399414 885 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RNU4-34P-201ENST00000410431 124 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RN7SKP279-201ENST00000411383 298 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RPS6P23-201ENST00000413224 722 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 MRPL50P2-201ENST00000416821 482 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC009161.1-201ENST00000417306 376 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RPS27AP6-201ENST00000427962 448 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 CBX3P6-201ENST00000430257 527 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 IFNA20P-201ENST00000436840 528 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC006335.2-201ENST00000437993 330 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RNU6-1208P-201ENST00000459588 107 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 OR2AO1P-201ENST00000476497 403 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RPS3AP50-201ENST00000487064 803 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC006390.1-201ENST00000508068 283 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 KLHL2P1-201ENST00000508691 521 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 POU5F1P7-201ENST00000508759 541 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RNA5SP92-201ENST00000516437 110 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 RNU6-1004P-201ENST00000516584 111 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC136777.2-201ENST00000522979 358 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC126615.2-201ENST00000553003 515 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 DPPA3P2-202ENST00000557188 1219 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AL080274.1-201ENST00000605565 220 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AL356585.4-201ENST00000623078 1229 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC040168.1-201ENST00000623594 991 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC132068.1-201ENST00000623805 459 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 AC083837.1-201ENST00000565297 2994 ntBASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SHKBP1Q8TBC3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms