Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNIP1Q8TAD8 AL122126.1-201ENST00000546905 1318 ntBASIC6.43□□□□□ -1.38
SNIP1Q8TAD8 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.43□□□□□ -1.38
SNIP1Q8TAD8 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SNIP1Q8TAD8 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNIP1Q8TAD8 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNIP1Q8TAD8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNIP1Q8TAD8 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC129502.1-201ENST00000623261 1654 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC006600.2-201ENST00000624834 2506 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 ZNF806-201ENST00000438300 1774 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 SNORD115-7-201ENST00000365306 82 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 RNA5SP77-201ENST00000365394 120 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 RNA5SP474-201ENST00000391234 90 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 SNORA77.2-201ENST00000408571 112 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 RN7SKP126-201ENST00000411143 300 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC073069.1-201ENST00000428657 441 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC091390.2-201ENST00000432573 374 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 RPL23AP74-201ENST00000437246 471 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 FCF1P4-201ENST00000448326 183 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC096922.1-201ENST00000461635 651 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC011476.1-201ENST00000466725 307 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 SNX18P23-201ENST00000510867 677 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 TBCAP3-201ENST00000512475 312 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 RN7SKP98-201ENST00000517070 156 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 RNU6-897P-201ENST00000517135 105 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AP005597.2-201ENST00000526238 341 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC090651.1-201ENST00000567865 634 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 MIR4443-201ENST00000585052 53 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC008687.2-201ENST00000597865 520 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC025857.2-201ENST00000602711 238 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC073657.2-201ENST00000605661 303 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AC245517.5-201ENST00000611529 162 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 MIR7973-1-201ENST00000614683 76 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AL596275.2-208ENST00000641192 594 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 AL354702.2-202ENST00000641481 890 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 TPTE2P4-201ENST00000258589 1605 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 SPATA31C2-201ENST00000324915 3777 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 PARP4P1-201ENST00000435945 2337 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 DDX18P3-201ENST00000404856 2007 ntBASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SNIP1Q8TAD8 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 AC074029.4-201ENST00000624796 1859 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 RNU6-1287P-201ENST00000362914 107 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 Y_RNA.200-201ENST00000364018 102 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 RNU6-128P-201ENST00000383976 107 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 RNU6-1060P-201ENST00000384664 107 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 SNORD58.1-201ENST00000391313 66 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 AL139156.1-201ENST00000412785 841 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 NMD3P2-201ENST00000421815 761 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 RPL7P37-201ENST00000425095 738 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 AL121916.1-201ENST00000429405 308 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 PRDX1P1-201ENST00000449329 596 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 AC005297.2-201ENST00000450430 606 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 SETP20-201ENST00000457046 852 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 SCARNA18-201ENST00000459004 134 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 Y_RNA.644-201ENST00000459006 113 ntBASIC6.41□□□□□ -1.38
SNIP1Q8TAD8 RN7SL254P-201ENST00000460609 284 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms