Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AL355834.1-201ENST00000556602 3965 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 NUP58P1-201ENST00000502546 1738 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC104964.3-201ENST00000606115 2860 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 OR4F13P-202ENST00000560066 2054 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 RNU6-984P-201ENST00000363236 109 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 RNU6-225P-201ENST00000384613 103 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 RNU2-8P-201ENST00000410727 190 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 TPMTP2-201ENST00000414372 726 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 MTCO2P5-201ENST00000422621 426 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 MTCO2P12-201ENST00000427426 682 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AP006222.1-205ENST00000450734 457 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 HLA-DPA3-207ENST00000454398 229 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 RPS17P5-201ENST00000498293 408 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 RNA5SP271-201ENST00000516700 88 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 SNORA70.20-201ENST00000516848 126 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC104986.1-201ENST00000517978 436 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 HMGB1P42-201ENST00000532126 553 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AL355375.2-201ENST00000574825 175 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AL360085.1-201ENST00000604713 532 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC008966.2-201ENST00000606157 453 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC078899.5-201ENST00000612475 178 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 PWAR1-201ENST00000624188 2414 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 AC022031.1-201ENST00000585985 2593 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
NUP43Q8NFH3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NUP43Q8NFH3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 RPL23AP57-201ENST00000332361 466 ntBASIC5.28□□□□□ -1.56
NUP43Q8NFH3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 RNA5SP453-201ENST00000362503 119 ntBASIC5.28□□□□□ -1.56
NUP43Q8NFH3 RNA5SP30-201ENST00000365552 115 ntBASIC5.28□□□□□ -1.56
NUP43Q8NFH3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 SNORA69-201ENST00000383895 132 ntBASIC5.28□□□□□ -1.56
NUP43Q8NFH3 RN7SKP206-201ENST00000410823 293 ntBASIC5.28□□□□□ -1.56
NUP43Q8NFH3 RAB28P1-201ENST00000411517 641 ntBASIC5.28□□□□□ -1.56
NUP43Q8NFH3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 MRPL50P2-201ENST00000416821 482 ntBASIC5.28□□□□□ -1.56
NUP43Q8NFH3 AC234782.4-201ENST00000417646 1048 ntBASIC5.28□□□□□ -1.56
NUP43Q8NFH3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.28□□□□□ -1.56
NUP43Q8NFH3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms