Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL122125.1-201ENST00000616999 600 ntBASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 AL022401.1-201ENST00000619498 108 ntBASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC44A3Q8N4M1 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SLC44A3Q8N4M1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
SLC44A3Q8N4M1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC011755.1-201ENST00000623763 2049 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 RNU4-91P-201ENST00000364778 135 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 OR1L6-202ENST00000373684 1044 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 RNU6-185P-201ENST00000384421 107 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 SNORA57.1-201ENST00000391227 145 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 RNA5SP241-201ENST00000391326 114 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 RNU6-77P-201ENST00000410554 91 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC092745.2-202ENST00000411880 369 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AL161449.1-201ENST00000414531 1199 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 FNDC3CP-201ENST00000420795 1155 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 UQCRBP1-201ENST00000421129 336 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC104651.1-201ENST00000427559 735 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 CDY14P-201ENST00000431260 1014 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 CDY23P-201ENST00000451661 1014 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 OR6C5P-201ENST00000452388 923 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AL359385.1-201ENST00000456509 365 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 RPS4XP12-201ENST00000461747 709 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC109327.1-201ENST00000471666 403 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC073522.1-201ENST00000483312 377 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 ATP1B1P1-201ENST00000509767 915 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC104108.1-201ENST00000509930 412 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC087808.1-201ENST00000520501 361 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AL049839.1-201ENST00000556151 657 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 RN7SL802P-201ENST00000577858 299 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC011451.2-201ENST00000604303 598 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AP003973.1-201ENST00000604639 691 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC106028.5-201ENST00000610332 395 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC099654.12-201ENST00000639868 649 ntBASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC44A3Q8N4M1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 OR4G2P-201ENST00000328113 903 ntBASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 Y_RNA.311-201ENST00000365068 96 ntBASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 RNU6-253P-201ENST00000384730 105 ntBASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 MIR548F1-201ENST00000408667 84 ntBASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 RPS7P13-201ENST00000413955 498 ntBASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 RPL23AP39-201ENST00000415533 405 ntBASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 MTCO2P19-201ENST00000427513 598 ntBASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A3Q8N4M1 AL139415.2-201ENST00000431968 163 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms