Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 DDX18P4-201ENST00000511690 1966 ntBASIC6.48□□□□□ -1.37
NPAS3Q8IXF0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 RBMY1HP-201ENST00000382759 1389 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AL355377.1-201ENST00000621125 1653 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 RN7SKP292-201ENST00000365522 317 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 Y_RNA.428-201ENST00000384078 102 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AL606923.1-201ENST00000406616 190 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 RNA5SP156-201ENST00000410250 110 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 GSTM3P2-201ENST00000412746 530 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC245096.1-201ENST00000413104 546 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC114814.2-201ENST00000419195 485 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 DDX3P2-201ENST00000446138 111 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC005077.1-201ENST00000449226 375 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AL139109.1-201ENST00000455491 297 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 VPS25P1-201ENST00000455691 508 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 RPL7P43-201ENST00000478876 753 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 RN7SL193P-201ENST00000491708 276 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 SCARNA18.1-201ENST00000516330 83 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 OR5D17P-201ENST00000531492 978 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AL137161.1-201ENST00000532231 390 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AP001804.2-201ENST00000533932 910 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC092121.1-201ENST00000569452 202 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC138761.3-201ENST00000579993 334 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AC018690.1-201ENST00000608144 626 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 AL445647.2-201ENST00000615170 130 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NPAS3Q8IXF0 OR52B5P-204ENST00000641744 3467 ntBASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 CUBNP3-201ENST00000457461 1784 ntBASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 LCOR-201ENST00000286067 4542 ntBASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.46□□□□□ -1.37
NPAS3Q8IXF0 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 MIR323A-201ENST00000362199 86 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 Y_RNA.473-201ENST00000384333 102 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 Y_RNA.478-201ENST00000384358 107 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 RN7SKP266-201ENST00000410232 287 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 U3.43-201ENST00000410734 213 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 RNU2-14P-201ENST00000411053 191 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 RNU6-120P-201ENST00000516077 103 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC022559.1-201ENST00000520905 205 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC022616.4-201ENST00000522985 181 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 HSBP1P1-201ENST00000555205 166 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC084783.1-201ENST00000565846 910 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 GLUD1P4-201ENST00000590914 418 ntBASIC6.46□□□□□ -1.38
NPAS3Q8IXF0 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms