Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AL049555.1-201ENST00000562834 1933 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 MTCO1P23-201ENST00000415223 1526 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 KARSP3-201ENST00000571212 1504 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 RPL23AP57-201ENST00000332361 466 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 RNU6-433P-201ENST00000363216 104 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 RNU6-501P-201ENST00000364072 100 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 RNU4-24P-201ENST00000364565 139 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 UBBP2-201ENST00000376781 231 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AL355379.1-201ENST00000405542 640 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 HMGB1P11-201ENST00000413899 637 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 ATG4AP1-201ENST00000416893 538 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AL512286.1-201ENST00000439244 400 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 RPL34P20-201ENST00000442771 351 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 RPL36AP15-201ENST00000444514 266 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AL360221.1-201ENST00000445989 335 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 EEF1E1P1-201ENST00000446998 430 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 PAXBP1P1-201ENST00000449315 447 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 RN7SL738P-201ENST00000470264 297 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AL024509.2-201ENST00000493462 493 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC093767.1-201ENST00000504523 156 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC093809.1-201ENST00000509155 340 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 BTF3P13-201ENST00000513224 490 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC021006.3-201ENST00000530771 192 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 PSMB7P1-201ENST00000556349 514 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC025588.4-201ENST00000615802 908 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 AC092192.1-201ENST00000633154 1018 ntBASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CCDC144BQ3MJ40 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AL031985.3-201ENST00000565390 2449 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AL390237.1-201ENST00000404226 1415 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 Y_RNA.436-201ENST00000384097 102 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 OR8V1P-201ENST00000395193 873 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AL390316.1-201ENST00000406279 553 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RN7SKP114-201ENST00000410327 279 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 HSFY4P-201ENST00000415994 1181 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RPL7P30-201ENST00000420888 709 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 MTND6P18-201ENST00000439477 513 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 VN1R32P-201ENST00000452234 905 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RNU7-136P-201ENST00000458819 69 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC087385.1-201ENST00000475062 312 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 CEACAMP10-202ENST00000495431 496 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 Y_RNA.695-201ENST00000516715 107 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 OR5AN2P-201ENST00000534535 896 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC006349.1-201ENST00000555526 235 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC009117.1-201ENST00000563948 554 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 LARP7P2-201ENST00000575306 125 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RN7SL52P-201ENST00000584271 284 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC008814.1-201ENST00000603797 406 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AL031320.1-201ENST00000604177 357 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC112187.2-201ENST00000604345 283 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC115621.1-201ENST00000604653 858 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AL162431.4-201ENST00000604674 411 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AC064872.1-201ENST00000604823 1072 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 AL009028.1-201ENST00000604895 802 ntBASIC5.85□□□□□ -1.47
CCDC144BQ3MJ40 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms