Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGCS1Q01581 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 MTND4P21-201ENST00000453886 1357 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AL021368.2-201ENST00000606125 5352 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCS1Q01581 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC007656.2-201ENST00000624902 4547 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 Y_RNA.126-201ENST00000363382 111 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 AL591419.1-201ENST00000427423 339 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 EXTL2P1-201ENST00000446218 416 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 RPL7P48-201ENST00000461513 746 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AL672167.3-201ENST00000465951 960 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 GAPDHP36-201ENST00000480688 918 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC107398.1-201ENST00000486904 505 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 HAUS1P3-201ENST00000523909 662 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC023161.2-201ENST00000551218 780 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 OR4U1P-201ENST00000554958 912 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 HSPE1P5-201ENST00000561489 272 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC106785.3-201ENST00000564064 847 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 MIR5685-201ENST00000579080 79 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AP001180.3-201ENST00000582221 145 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 AL020997.2-201ENST00000602607 184 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AP003117.1-201ENST00000602771 554 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 AL021368.1-201ENST00000607490 540 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 AC007342.8-201ENST00000623278 678 ntBASIC3.53□□□□□ -1.84
HMGCS1Q01581 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HMGCS1Q01581 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.53□□□□□ -1.84
HMGCS1Q01581 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
HMGCS1Q01581 CEP170P1-201ENST00000502249 4587 ntBASIC3.53□□□□□ -1.85
HMGCS1Q01581 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.85
HMGCS1Q01581 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 AL353746.1-201ENST00000566293 6881 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 RNU1-64P-201ENST00000365443 163 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 RPL7P60-201ENST00000397636 735 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 MTND2P15-201ENST00000418575 892 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 MTND4P24-201ENST00000424002 397 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC002075.2-201ENST00000425207 252 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 CBX1P4-201ENST00000439415 457 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC020898.1-201ENST00000474167 787 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 RPS3AP50-201ENST00000487064 803 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC068305.1-201ENST00000497406 726 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC108120.2-201ENST00000512973 294 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC093853.1-201ENST00000515689 483 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 MIR4738-201ENST00000579134 87 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC005242.1-201ENST00000585658 438 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC093227.2-201ENST00000589357 285 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC040174.2-201ENST00000602701 465 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 AL451086.1-201ENST00000605596 223 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC005344.1-201ENST00000613391 459 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC099669.2-201ENST00000616549 437 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC025016.1-201ENST00000616746 682 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCS1Q01581 C2orf27A-204ENST00000623058 969 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 AC015726.3-201ENST00000624501 418 ntBASIC3.52□□□□□ -1.85
HMGCS1Q01581 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS1Q01581 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 DCAF13P3-201ENST00000561147 1334 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AL353743.4-201ENST00000422653 1547 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 RNU1-87P-201ENST00000363727 170 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 SNORD115-48-201ENST00000364764 76 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 SNORD51.1-201ENST00000365405 77 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms