Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SEPT7P2-202ENST00000398921 823 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 AC004552.1-201ENST00000419089 348 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 AC007563.3-201ENST00000433233 371 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC104446.1-201ENST00000613728 1321 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.01□□□□□ -2.09
HSPG2P98160 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HSPG2P98160 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HSPG2P98160 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.01□□□□□ -2.09
HSPG2P98160 RPL23AP23-201ENST00000452590 471 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 AC068724.1-201ENST00000487100 792 ntBASIC2.01□□□□□ -2.09
HSPG2P98160 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.01□□□□□ -2.09
HSPG2P98160 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.01□□□□□ -2.09
HSPG2P98160 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.01□□□□□ -2.09
HSPG2P98160 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 MFSD8-233ENST00000641482 4860 ntBASIC2□□□□□ -2.09
HSPG2P98160 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 AP002512.4-202ENST00000641599 4530 ntBASIC2□□□□□ -2.09
HSPG2P98160 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC2□□□□□ -2.09
HSPG2P98160 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 CD2-201ENST00000369477 478 ntTSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 AC096638.2-201ENST00000434965 711 ntBASIC2□□□□□ -2.09
HSPG2P98160 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 AC010469.1-201ENST00000463864 576 ntBASIC2□□□□□ -2.09
HSPG2P98160 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2□□□□□ -2.09
HSPG2P98160 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2□□□□□ -2.09
HSPG2P98160 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2□□□□□ -2.09
HSPG2P98160 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 AL591424.2-201ENST00000617023 128 ntBASIC2□□□□□ -2.09
HSPG2P98160 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2□□□□□ -2.09
HSPG2P98160 AC019097.1-201ENST00000424783 735 ntBASIC2□□□□□ -2.09
HSPG2P98160 AC069285.2-201ENST00000440210 275 ntBASIC2□□□□□ -2.09
HSPG2P98160 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2□□□□□ -2.09
HSPG2P98160 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC2□□□□□ -2.09
HSPG2P98160 AC093524.1-201ENST00000564266 1094 ntBASIC2□□□□□ -2.09
HSPG2P98160 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC2□□□□□ -2.09
HSPG2P98160 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2□□□□□ -2.09
HSPG2P98160 IFNA11P-201ENST00000446352 526 ntBASIC2□□□□□ -2.09
HSPG2P98160 AC099063.2-201ENST00000446360 662 ntBASIC2□□□□□ -2.09
HSPG2P98160 VN1R48P-201ENST00000448149 1036 ntBASIC2□□□□□ -2.09
HSPG2P98160 AC005229.2-201ENST00000456995 399 ntBASIC2□□□□□ -2.09
HSPG2P98160 AC084357.1-201ENST00000473404 255 ntBASIC2□□□□□ -2.09
HSPG2P98160 BTG4P1-201ENST00000510421 183 ntBASIC2□□□□□ -2.09
HSPG2P98160 AC009812.2-201ENST00000517657 457 ntBASIC2□□□□□ -2.09
HSPG2P98160 AL139174.1-201ENST00000531489 886 ntBASIC2□□□□□ -2.09
HSPG2P98160 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2□□□□□ -2.09
HSPG2P98160 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 AL049780.3-201ENST00000624612 1583 ntBASIC2□□□□□ -2.09
HSPG2P98160 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HSPG2P98160 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2□□□□□ -2.09
HSPG2P98160 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 GVINP1-202ENST00000531871 7271 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 RNA5SP42-201ENST00000364278 115 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 MRPL50P2-201ENST00000416821 482 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 EEF1A1P37-201ENST00000522748 715 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.99□□□□□ -2.09
HSPG2P98160 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.99□□□□□ -2.09
HSPG2P98160 AC099063.3-201ENST00000642066 185 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
HSPG2P98160 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 AC000123.3-201ENST00000624029 4975 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HSPG2P98160 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HSPG2P98160 AC010655.1-201ENST00000449336 292 ntBASIC1.99□□□□□ -2.09
HSPG2P98160 ELOCP29-201ENST00000588193 334 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms