Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC009268.1-201ENST00000561352 1203 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC023158.1-201ENST00000561632 1025 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC124068.1-201ENST00000563131 678 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC037471.2-201ENST00000564941 598 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNA1P78396 AL031985.2-201ENST00000600955 480 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 LLPHP1-201ENST00000603571 367 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 SNORA62.6-201ENST00000606322 83 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 AC105429.2-201ENST00000610567 517 ntBASIC4.29□□□□□ -1.72
CCNA1P78396 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNA1P78396 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNA1P78396 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCNA1P78396 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNA1P78396 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNA1P78396 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNA1P78396 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNA1P78396 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
CCNA1P78396 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCNA1P78396 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNA1P78396 MIR448-201ENST00000362131 111 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNA1P78396 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCNA1P78396 RPL7P60-201ENST00000397636 735 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNA1P78396 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNA1P78396 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNA1P78396 CYCSP4-201ENST00000429682 331 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.28□□□□□ -1.72
CCNA1P78396 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNA1P78396 AC245517.2-201ENST00000442890 346 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 RAD1P2-201ENST00000446414 663 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 RPS17P13-201ENST00000448974 407 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNA1P78396 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.28□□□□□ -1.72
CCNA1P78396 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNA1P78396 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNA1P78396 HMGB1P47-201ENST00000511281 589 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNA1P78396 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CCNA1P78396 AC008676.3-201ENST00000521237 435 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 PTP4A1P6-201ENST00000531034 478 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNA1P78396 MIR7851-201ENST00000610611 160 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.28□□□□□ -1.72
CCNA1P78396 AC119674.1-207ENST00000641355 633 ntBASIC4.28□□□□□ -1.72
CCNA1P78396 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNA1P78396 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNA1P78396 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNA1P78396 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNA1P78396 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCNA1P78396 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCNA1P78396 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNA1P78396 ZNF962P-201ENST00000443465 3140 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCNA1P78396 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNA1P78396 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNA1P78396 RNU6-452P-201ENST00000384406 107 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNA1P78396 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNA1P78396 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.27□□□□□ -1.73
CCNA1P78396 KCTD9P3-201ENST00000434597 1169 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 AC105402.2-201ENST00000438503 358 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 AC006480.1-201ENST00000449887 378 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 AC007967.1-201ENST00000455422 1159 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 AC087385.1-201ENST00000475062 312 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNA1P78396 RPL7P24-201ENST00000493052 752 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 RN7SKP13-201ENST00000515933 244 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 Vault.1-201ENST00000516474 102 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 RANP9-201ENST00000519957 271 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCNA1P78396 CBX3P5-201ENST00000552017 521 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNA1P78396 PCNAP1-202ENST00000595299 752 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 AP003117.1-201ENST00000602771 554 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCNA1P78396 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNA1P78396 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
CCNA1P78396 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNA1P78396 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNA1P78396 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNA1P78396 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.26□□□□□ -1.73
CCNA1P78396 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNA1P78396 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNA1P78396 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 RNA5SP267-201ENST00000364893 126 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCNA1P78396 OR52E6-202ENST00000379946 954 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 RNA5SP424-201ENST00000390988 115 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 CCNB2P1-201ENST00000399411 1150 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 RPL7P53-201ENST00000421245 739 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 AC008065.1-201ENST00000428525 348 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNA1P78396 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNA1P78396 AC097713.2-201ENST00000430199 356 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms