Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.39□□□□□ -1.55
YBX1P67809 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 MIR544B-201ENST00000582372 78 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 FO393422.1-201ENST00000603908 708 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AL133338.2-201ENST00000604292 736 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC007621.1-201ENST00000604544 437 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 AC010632.3-201ENST00000611377 369 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
YBX1P67809 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.39□□□□□ -1.55
YBX1P67809 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
YBX1P67809 AC097461.1-201ENST00000568928 2821 ntBASIC5.39□□□□□ -1.55
YBX1P67809 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
YBX1P67809 AC006378.2-201ENST00000623178 2476 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
YBX1P67809 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.39□□□□□ -1.55
YBX1P67809 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 CASC19-221ENST00000641309 1382 ntBASIC5.39□□□□□ -1.55
YBX1P67809 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
YBX1P67809 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
YBX1P67809 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
YBX1P67809 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
YBX1P67809 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
YBX1P67809 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
YBX1P67809 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
YBX1P67809 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 AL353796.1-201ENST00000561542 3241 ntBASIC5.38□□□□□ -1.55
YBX1P67809 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
YBX1P67809 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 AL121886.1-201ENST00000358609 435 ntBASIC5.38□□□□□ -1.55
YBX1P67809 RNY3P3-201ENST00000363816 102 ntBASIC5.38□□□□□ -1.55
YBX1P67809 Y_RNA.431-201ENST00000384086 102 ntBASIC5.38□□□□□ -1.55
YBX1P67809 SNORA5.1-201ENST00000384275 131 ntBASIC5.38□□□□□ -1.55
YBX1P67809 Z97832.1-201ENST00000402490 328 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AL136131.1-201ENST00000406079 803 ntBASIC5.38□□□□□ -1.55
YBX1P67809 MIR320C1-201ENST00000408566 88 ntBASIC5.38□□□□□ -1.55
YBX1P67809 RNA5SP118-201ENST00000410385 109 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.38□□□□□ -1.55
YBX1P67809 AC013429.2-201ENST00000418798 781 ntBASIC5.38□□□□□ -1.55
YBX1P67809 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.38□□□□□ -1.55
YBX1P67809 AL158073.1-201ENST00000426848 1104 ntBASIC5.38□□□□□ -1.55
YBX1P67809 SAR1AP4-201ENST00000429225 591 ntBASIC5.38□□□□□ -1.55
YBX1P67809 DYNLL1P7-201ENST00000429273 258 ntBASIC5.38□□□□□ -1.55
YBX1P67809 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 RPS7P5-201ENST00000441482 581 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AL163193.1-201ENST00000444895 788 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 AL596266.1-201ENST00000448132 400 ntBASIC5.38□□□□□ -1.55
YBX1P67809 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 AL121877.1-201ENST00000453704 622 ntBASIC5.38□□□□□ -1.55
YBX1P67809 RNU6-420P-201ENST00000458780 107 ntBASIC5.38□□□□□ -1.55
YBX1P67809 RN7SL583P-201ENST00000475692 287 ntBASIC5.38□□□□□ -1.55
YBX1P67809 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 AC106872.3-201ENST00000495104 446 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.38□□□□□ -1.55
YBX1P67809 IGLV2-28-201ENST00000520681 304 ntBASIC5.38□□□□□ -1.55
YBX1P67809 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.38□□□□□ -1.55
YBX1P67809 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.38□□□□□ -1.55
YBX1P67809 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.38□□□□□ -1.55
YBX1P67809 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 PSMA3P-201ENST00000555485 635 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AL049872.1-201ENST00000556323 322 ntBASIC5.38□□□□□ -1.55
YBX1P67809 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 MIR4311-201ENST00000580794 100 ntBASIC5.38□□□□□ -1.55
YBX1P67809 MIR1273E-201ENST00000581165 102 ntBASIC5.38□□□□□ -1.55
YBX1P67809 HMGN1P30-201ENST00000589286 268 ntBASIC5.38□□□□□ -1.55
YBX1P67809 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.38□□□□□ -1.55
YBX1P67809 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 AC243960.4-201ENST00000600532 288 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AC007687.1-201ENST00000602704 304 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AC104695.2-201ENST00000605056 775 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AL161734.1-201ENST00000609720 557 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AC018926.3-201ENST00000618841 406 ntBASIC5.38□□□□□ -1.55
YBX1P67809 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.38□□□□□ -1.55
YBX1P67809 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 AC007996.1-201ENST00000620414 2821 ntBASIC5.38□□□□□ -1.55
YBX1P67809 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
YBX1P67809 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
YBX1P67809 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms