Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PKNOX1P55347 MIR1303-201ENST00000408625 86 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AC234782.4-201ENST00000417646 1048 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 PNRC2P1-201ENST00000423940 420 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 MOB1AP1-201ENST00000430903 535 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AC023347.2-201ENST00000433994 462 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 MTND4P15-201ENST00000437913 1033 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.67□□□□□ -1.82
PKNOX1P55347 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 AL353718.1-201ENST00000451028 517 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.67□□□□□ -1.82
PKNOX1P55347 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.67□□□□□ -1.82
PKNOX1P55347 RPL37P3-201ENST00000456825 293 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.67□□□□□ -1.82
PKNOX1P55347 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.67□□□□□ -1.82
PKNOX1P55347 RPS7P7-201ENST00000463499 571 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AC006463.2-201ENST00000473326 348 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 RPL23AP73-201ENST00000492507 471 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.67□□□□□ -1.82
PKNOX1P55347 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.67□□□□□ -1.82
PKNOX1P55347 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.67□□□□□ -1.82
PKNOX1P55347 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.67□□□□□ -1.82
PKNOX1P55347 RNU6-1102P-201ENST00000516149 96 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.67□□□□□ -1.82
PKNOX1P55347 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.67□□□□□ -1.82
PKNOX1P55347 AC006960.3-201ENST00000561845 705 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 CYP2C60P-201ENST00000566088 139 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.67□□□□□ -1.82
PKNOX1P55347 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.67□□□□□ -1.82
PKNOX1P55347 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.67□□□□□ -1.82
PKNOX1P55347 AP001180.3-201ENST00000582221 145 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 MIR4443-201ENST00000585052 53 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
PKNOX1P55347 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.67□□□□□ -1.82
PKNOX1P55347 SNORA62.6-201ENST00000606322 83 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AC103710.3-201ENST00000608157 948 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.67□□□□□ -1.82
PKNOX1P55347 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AC083865.1-201ENST00000636634 831 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 MTND5P11-201ENST00000511037 1812 ntBASIC3.67□□□□□ -1.82
PKNOX1P55347 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PKNOX1P55347 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PKNOX1P55347 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.66□□□□□ -1.82
PKNOX1P55347 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PKNOX1P55347 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 RNU6-283P-201ENST00000364788 107 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 SNORA70C-201ENST00000384538 135 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 HMGB3P18-201ENST00000406327 590 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 TATDN1P1-201ENST00000414123 891 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AL390879.2-203ENST00000426943 1121 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC005189.1-201ENST00000431286 310 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 RNFT1P2-201ENST00000443064 757 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 CYCSP53-201ENST00000455540 265 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.66□□□□□ -1.82
PKNOX1P55347 RPS4XP15-201ENST00000489210 795 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC133963.2-201ENST00000513686 578 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 SNORA76.2-201ENST00000517095 137 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AC008489.1-201ENST00000524271 483 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 OR5AP1P-201ENST00000529730 940 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.66□□□□□ -1.82
PKNOX1P55347 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.66□□□□□ -1.82
PKNOX1P55347 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AC120057.2-201ENST00000571520 271 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 ZNF92P2-201ENST00000600543 1059 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC079880.2-201ENST00000603790 1213 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AL591034.3-201ENST00000605511 685 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.66□□□□□ -1.82
PKNOX1P55347 AC245389.2-201ENST00000616023 576 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC243756.2-201ENST00000618406 463 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC242843.1-201ENST00000618702 573 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AC079684.1-201ENST00000621405 437 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 MIR6500-201ENST00000622700 86 ntBASIC3.66□□□□□ -1.82
PKNOX1P55347 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.66□□□□□ -1.82
PKNOX1P55347 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PKNOX1P55347 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms