Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGCS2P54868 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HMGCS2P54868 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HMGCS2P54868 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS2P54868 Z86062.1-201ENST00000406773 777 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 TRGV6-201ENST00000417928 299 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 OR5AW1P-201ENST00000426334 1006 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AC017083.1-201ENST00000428093 483 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AC073508.1-201ENST00000428866 656 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AC005326.1-201ENST00000429197 123 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGCS2P54868 ZNF965P-201ENST00000432501 817 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 RPL21P110-201ENST00000433345 446 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS2P54868 MTND2P30-201ENST00000456663 382 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 MTCO1P31-201ENST00000506355 492 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS2P54868 AF186190.1-201ENST00000517470 480 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS2P54868 SUMO2P20-201ENST00000520803 283 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS2P54868 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HMGCS2P54868 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS2P54868 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.19□□□□□ -1.74
HMGCS2P54868 AL121766.1-201ENST00000547436 487 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AC023161.2-201ENST00000551218 780 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AC011611.1-201ENST00000552179 197 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AC018552.3-201ENST00000567416 561 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.19□□□□□ -1.74
HMGCS2P54868 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS2P54868 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.19□□□□□ -1.74
HMGCS2P54868 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS2P54868 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.19□□□□□ -1.74
HMGCS2P54868 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS2P54868 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HMGCS2P54868 AC017002.4-201ENST00000604721 1525 ntBASIC4.19□□□□□ -1.74
HMGCS2P54868 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HMGCS2P54868 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HMGCS2P54868 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS2P54868 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS2P54868 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS2P54868 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HMGCS2P54868 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HMGCS2P54868 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HMGCS2P54868 MIR513A2-201ENST00000385249 127 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 RNA5SP146-201ENST00000410743 123 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 RANP4-201ENST00000413361 655 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 HSFY4P-201ENST00000415994 1181 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 HSFY1P1-201ENST00000423928 1178 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC087650.1-201ENST00000431445 468 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AL591503.2-201ENST00000442314 1005 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS2P54868 AL627224.1-201ENST00000448334 444 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCS2P54868 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
HMGCS2P54868 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.18□□□□□ -1.74
HMGCS2P54868 HMGB1P3-201ENST00000502802 616 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 FTH1P24-201ENST00000503502 462 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC021087.2-201ENST00000504656 1203 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC008628.1-201ENST00000508663 265 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 AC108471.1-201ENST00000513977 287 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC034244.2-201ENST00000514668 858 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 RNU2-27P-201ENST00000516185 142 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 OR4R2P-201ENST00000530815 597 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.18□□□□□ -1.74
HMGCS2P54868 AC068446.3-201ENST00000555285 382 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 MRPS35P3-201ENST00000603189 709 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC004775.1-201ENST00000607389 753 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 U4.6-201ENST00000621618 127 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HMGCS2P54868 AC097372.4-201ENST00000625025 466 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 OR5AC4P-202ENST00000642086 985 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 AC068254.2-201ENST00000623938 3577 ntBASIC4.18□□□□□ -1.74
HMGCS2P54868 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.18□□□□□ -1.74
HMGCS2P54868 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS2P54868 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS2P54868 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS2P54868 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
HMGCS2P54868 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HMGCS2P54868 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HMGCS2P54868 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
HMGCS2P54868 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HMGCS2P54868 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HMGCS2P54868 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms