Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AF001550.2-201ENST00000636643 217 ntBASIC4.88□□□□□ -1.63
COPB1P53618 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.88□□□□□ -1.63
COPB1P53618 SDAD1P1-202ENST00000524156 2051 ntBASIC4.88□□□□□ -1.63
COPB1P53618 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPB1P53618 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COPB1P53618 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.87□□□□□ -1.63
COPB1P53618 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPB1P53618 Y_RNA.77-201ENST00000362962 107 ntBASIC4.87□□□□□ -1.63
COPB1P53618 RNU6-623P-201ENST00000363143 105 ntBASIC4.87□□□□□ -1.63
COPB1P53618 RNA5SP28-201ENST00000363841 119 ntBASIC4.87□□□□□ -1.63
COPB1P53618 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPB1P53618 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 MIR16-1-201ENST00000385271 89 ntBASIC4.87□□□□□ -1.63
COPB1P53618 SNORD65.1-201ENST00000390889 71 ntBASIC4.87□□□□□ -1.63
COPB1P53618 MIR1303-201ENST00000408625 86 ntBASIC4.87□□□□□ -1.63
COPB1P53618 NRBF2P2-201ENST00000413087 861 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.87□□□□□ -1.63
COPB1P53618 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.87□□□□□ -1.63
COPB1P53618 AC114814.2-201ENST00000419195 485 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.87□□□□□ -1.63
COPB1P53618 GTF2IP23-201ENST00000423746 351 ntBASIC4.87□□□□□ -1.63
COPB1P53618 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.87□□□□□ -1.63
COPB1P53618 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.87□□□□□ -1.63
COPB1P53618 AC098826.1-201ENST00000433943 471 ntBASIC4.87□□□□□ -1.63
COPB1P53618 HLA-N-201ENST00000437516 135 ntBASIC4.87□□□□□ -1.63
COPB1P53618 USP9YP22-201ENST00000438971 294 ntBASIC4.87□□□□□ -1.63
COPB1P53618 RPL21P133-201ENST00000443666 476 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC073587.1-201ENST00000447093 876 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.87□□□□□ -1.63
COPB1P53618 RN7SL481P-201ENST00000477764 299 ntBASIC4.87□□□□□ -1.63
COPB1P53618 NIP7P2-201ENST00000485801 544 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.87□□□□□ -1.63
COPB1P53618 WBP1LP4-201ENST00000505043 344 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 RAB9BP1-201ENST00000519581 626 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.87□□□□□ -1.63
COPB1P53618 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COPB1P53618 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.87□□□□□ -1.63
COPB1P53618 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 ISCA1P3-201ENST00000577104 373 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.87□□□□□ -1.63
COPB1P53618 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.87□□□□□ -1.63
COPB1P53618 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.87□□□□□ -1.63
COPB1P53618 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.87□□□□□ -1.63
COPB1P53618 AL161616.1-201ENST00000611867 286 ntBASIC4.87□□□□□ -1.63
COPB1P53618 HULC.1-201ENST00000612720 240 ntBASIC4.87□□□□□ -1.63
COPB1P53618 MIR7973-1-201ENST00000614683 76 ntBASIC4.87□□□□□ -1.63
COPB1P53618 SNX18P1Y-201ENST00000616231 511 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC121761.2-201ENST00000617300 689 ntBASIC4.87□□□□□ -1.63
COPB1P53618 MIR6891-201ENST00000618788 93 ntBASIC4.87□□□□□ -1.63
COPB1P53618 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COPB1P53618 CASC19-284ENST00000642142 1868 ntBASIC4.87□□□□□ -1.63
COPB1P53618 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPB1P53618 MTND4P5-201ENST00000435821 1374 ntBASIC4.87□□□□□ -1.63
COPB1P53618 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COPB1P53618 SGO1P1-201ENST00000603525 1447 ntBASIC4.87□□□□□ -1.63
COPB1P53618 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPB1P53618 VPS35P1-201ENST00000563400 1518 ntBASIC4.87□□□□□ -1.63
COPB1P53618 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
COPB1P53618 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COPB1P53618 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COPB1P53618 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COPB1P53618 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
COPB1P53618 RNA5SP52-201ENST00000362448 134 ntBASIC4.86□□□□□ -1.63
COPB1P53618 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 RNU2-50P-201ENST00000410494 143 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.86□□□□□ -1.63
COPB1P53618 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.86□□□□□ -1.63
COPB1P53618 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC010153.1-201ENST00000432862 727 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.86□□□□□ -1.63
COPB1P53618 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.86□□□□□ -1.63
COPB1P53618 MTCYBP34-201ENST00000439552 670 ntBASIC4.86□□□□□ -1.63
COPB1P53618 UBE2V1P3-201ENST00000439651 417 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.86□□□□□ -1.63
COPB1P53618 RPL36AP15-201ENST00000444514 266 ntBASIC4.86□□□□□ -1.63
COPB1P53618 RFC5P1-201ENST00000454419 874 ntBASIC4.86□□□□□ -1.63
COPB1P53618 MTCO3P16-201ENST00000454456 754 ntBASIC4.86□□□□□ -1.63
COPB1P53618 RPS27AP17-201ENST00000463344 455 ntBASIC4.86□□□□□ -1.63
COPB1P53618 RPL5P24-201ENST00000463742 885 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC096741.1-201ENST00000472250 846 ntBASIC4.86□□□□□ -1.63
COPB1P53618 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.86□□□□□ -1.63
COPB1P53618 GAPDHP36-201ENST00000480688 918 ntBASIC4.86□□□□□ -1.63
COPB1P53618 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 IGLV2-34-201ENST00000490007 283 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC080014.1-201ENST00000496877 1201 ntBASIC4.86□□□□□ -1.63
COPB1P53618 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.86□□□□□ -1.63
COPB1P53618 MTCYBP37-201ENST00000510642 1133 ntBASIC4.86□□□□□ -1.63
COPB1P53618 AC079395.1-201ENST00000510981 262 ntBASIC4.86□□□□□ -1.63
COPB1P53618 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms