Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 RN7SL812P-201ENST00000493791 279 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AL592156.1-201ENST00000508758 304 ntBASIC4.13□□□□□ -1.75
PDX1P52945 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.13□□□□□ -1.75
PDX1P52945 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.13□□□□□ -1.75
PDX1P52945 RN7SKP265-201ENST00000516448 223 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AC023632.1-201ENST00000518463 375 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 AC105233.3-201ENST00000531125 744 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AC022882.1-201ENST00000532142 501 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.13□□□□□ -1.75
PDX1P52945 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.13□□□□□ -1.75
PDX1P52945 OR8K4P-201ENST00000534608 872 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.13□□□□□ -1.75
PDX1P52945 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 AC044913.1-201ENST00000557200 430 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AGGF1P6-201ENST00000569213 976 ntBASIC4.13□□□□□ -1.75
PDX1P52945 MTATP6P24-201ENST00000576835 677 ntBASIC4.13□□□□□ -1.75
PDX1P52945 MIR4666A-201ENST00000580160 79 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AC008759.1-201ENST00000589783 983 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AL035411.2-201ENST00000604022 421 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AC013244.3-201ENST00000605614 388 ntBASIC4.13□□□□□ -1.75
PDX1P52945 Z98200.1-201ENST00000607298 470 ntBASIC4.13□□□□□ -1.75
PDX1P52945 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 AL021997.2-201ENST00000615674 271 ntBASIC4.13□□□□□ -1.75
PDX1P52945 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.13□□□□□ -1.75
PDX1P52945 AL356863.1-201ENST00000623378 1080 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AC007546.2-201ENST00000623996 360 ntBASIC4.13□□□□□ -1.75
PDX1P52945 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.13□□□□□ -1.75
PDX1P52945 AC068254.2-201ENST00000623938 3577 ntBASIC4.13□□□□□ -1.75
PDX1P52945 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 AC017104.4-201ENST00000636283 1592 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AL355578.1-201ENST00000607405 1328 ntBASIC4.13□□□□□ -1.75
PDX1P52945 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PDX1P52945 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 AC025263.3-201ENST00000622965 1396 ntBASIC4.13□□□□□ -1.75
PDX1P52945 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDX1P52945 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PDX1P52945 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDX1P52945 USP9YP4-201ENST00000424401 1745 ntBASIC4.12□□□□□ -1.75
PDX1P52945 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PDX1P52945 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PDX1P52945 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDX1P52945 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDX1P52945 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.12□□□□□ -1.75
PDX1P52945 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDX1P52945 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDX1P52945 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDX1P52945 RNA5SP307-201ENST00000362863 116 ntBASIC4.12□□□□□ -1.75
PDX1P52945 RNA5SP22-201ENST00000365393 109 ntBASIC4.12□□□□□ -1.75
PDX1P52945 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
PDX1P52945 ATP5F1P3-201ENST00000397213 657 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AL079342.2-201ENST00000403367 482 ntBASIC4.12□□□□□ -1.75
PDX1P52945 SFR1P1-201ENST00000403720 688 ntBASIC4.12□□□□□ -1.75
PDX1P52945 RPL21P65-201ENST00000406094 466 ntBASIC4.12□□□□□ -1.75
PDX1P52945 RPS3AP25-201ENST00000411660 793 ntBASIC4.12□□□□□ -1.75
PDX1P52945 RPS3AP37-201ENST00000419176 745 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.12□□□□□ -1.75
PDX1P52945 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.12□□□□□ -1.75
PDX1P52945 RPEP2-201ENST00000432149 701 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 RAB11AP1-201ENST00000442978 646 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 AL162151.2-201ENST00000448875 158 ntBASIC4.12□□□□□ -1.75
PDX1P52945 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 RPL35AP15-201ENST00000468042 339 ntBASIC4.12□□□□□ -1.75
PDX1P52945 CCDC75P1-201ENST00000469247 791 ntBASIC4.12□□□□□ -1.75
PDX1P52945 VN1R105P-201ENST00000486595 910 ntBASIC4.12□□□□□ -1.75
PDX1P52945 UBA52P3-201ENST00000491303 382 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AP002812.1-201ENST00000495378 474 ntBASIC4.12□□□□□ -1.75
PDX1P52945 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDX1P52945 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 AC008885.2-201ENST00000509506 930 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDX1P52945 AC100770.1-201ENST00000532310 322 ntBASIC4.12□□□□□ -1.75
PDX1P52945 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.12□□□□□ -1.75
PDX1P52945 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
PDX1P52945 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.12□□□□□ -1.75
PDX1P52945 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.12□□□□□ -1.75
PDX1P52945 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.12□□□□□ -1.75
PDX1P52945 MIR3158-1-201ENST00000583596 81 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 AC015688.2-201ENST00000584523 262 ntBASIC4.12□□□□□ -1.75
PDX1P52945 VN1R83P-201ENST00000595685 445 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.12□□□□□ -1.75
PDX1P52945 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.12□□□□□ -1.75
PDX1P52945 AC112200.1-201ENST00000625015 234 ntBASIC4.12□□□□□ -1.75
PDX1P52945 AP001002.2-201ENST00000625137 386 ntBASIC4.12□□□□□ -1.75
PDX1P52945 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.12□□□□□ -1.75
PDX1P52945 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PDX1P52945 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PDX1P52945 AC000367.1-201ENST00000452711 1766 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms