Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.16□□□□□ -1.42
USP11P51784 CYCSP2-201ENST00000558168 301 ntBASIC6.16□□□□□ -1.42
USP11P51784 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.16□□□□□ -1.42
USP11P51784 AC005341.1-201ENST00000571086 708 ntBASIC6.16□□□□□ -1.42
USP11P51784 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.16□□□□□ -1.42
USP11P51784 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.16□□□□□ -1.42
USP11P51784 FKBP1AP1-201ENST00000594588 318 ntBASIC6.16□□□□□ -1.42
USP11P51784 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.16□□□□□ -1.42
USP11P51784 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USP11P51784 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.16□□□□□ -1.42
USP11P51784 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.16□□□□□ -1.42
USP11P51784 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.16□□□□□ -1.42
USP11P51784 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.16□□□□□ -1.42
USP11P51784 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP11P51784 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USP11P51784 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP11P51784 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
USP11P51784 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.15□□□□□ -1.42
USP11P51784 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
USP11P51784 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP11P51784 AC109446.4-201ENST00000623235 2755 ntBASIC6.15□□□□□ -1.42
USP11P51784 OR4A15-201ENST00000314706 1035 ntBASIC6.15□□□□□ -1.42
USP11P51784 MIR133A2-201ENST00000347538 102 ntBASIC6.15□□□□□ -1.42
USP11P51784 RNU6-582P-201ENST00000362989 107 ntBASIC6.15□□□□□ -1.42
USP11P51784 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP11P51784 RNU6-809P-201ENST00000384461 107 ntBASIC6.15□□□□□ -1.42
USP11P51784 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USP11P51784 AL133388.1-201ENST00000404509 287 ntBASIC6.15□□□□□ -1.42
USP11P51784 AL603766.1-201ENST00000407763 664 ntBASIC6.15□□□□□ -1.42
USP11P51784 AL450338.1-201ENST00000407987 512 ntBASIC6.15□□□□□ -1.42
USP11P51784 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.15□□□□□ -1.42
USP11P51784 RAB28P1-201ENST00000411517 641 ntBASIC6.15□□□□□ -1.42
USP11P51784 BOLA3P4-201ENST00000418151 400 ntBASIC6.15□□□□□ -1.42
USP11P51784 AL353193.1-201ENST00000421444 268 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.15□□□□□ -1.42
USP11P51784 ISCA1P6-201ENST00000427740 390 ntBASIC6.15□□□□□ -1.42
USP11P51784 DYNLL1P7-201ENST00000429273 258 ntBASIC6.15□□□□□ -1.42
USP11P51784 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.15□□□□□ -1.42
USP11P51784 GTF2IP20-201ENST00000431663 360 ntBASIC6.15□□□□□ -1.42
USP11P51784 NPM1P18-201ENST00000434232 732 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.15□□□□□ -1.42
USP11P51784 MED28P3-201ENST00000444288 531 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC140076.1-201ENST00000449897 361 ntBASIC6.15□□□□□ -1.42
USP11P51784 RNU6-420P-201ENST00000458780 107 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC092754.1-201ENST00000472975 479 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC139783.2-201ENST00000504847 1145 ntBASIC6.15□□□□□ -1.42
USP11P51784 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP11P51784 RNU2-46P-201ENST00000517038 113 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC138832.1-201ENST00000522871 556 ntBASIC6.15□□□□□ -1.42
USP11P51784 HSPA8P13-201ENST00000523715 472 ntBASIC6.15□□□□□ -1.42
USP11P51784 DUX4L52-201ENST00000549363 777 ntBASIC6.15□□□□□ -1.42
USP11P51784 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.15□□□□□ -1.42
USP11P51784 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.15□□□□□ -1.42
USP11P51784 AC020661.2-201ENST00000560114 134 ntBASIC6.15□□□□□ -1.42
USP11P51784 AL355375.2-201ENST00000574825 175 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.15□□□□□ -1.42
USP11P51784 AC112187.2-201ENST00000604345 283 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC106900.2-201ENST00000604994 317 ntBASIC6.15□□□□□ -1.42
USP11P51784 AP004247.3-201ENST00000608682 624 ntBASIC6.15□□□□□ -1.42
USP11P51784 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.15□□□□□ -1.42
USP11P51784 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.15□□□□□ -1.42
USP11P51784 AC009268.2-201ENST00000621925 457 ntBASIC6.15□□□□□ -1.42
USP11P51784 PISRT1-201ENST00000626175 531 ntBASIC6.15□□□□□ -1.42
USP11P51784 AC016745.2-201ENST00000608834 3443 ntBASIC6.15□□□□□ -1.42
USP11P51784 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP11P51784 AC100757.1-201ENST00000616872 1835 ntBASIC6.15□□□□□ -1.43
USP11P51784 MTND4P27-201ENST00000450813 1354 ntBASIC6.15□□□□□ -1.43
USP11P51784 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
USP11P51784 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
USP11P51784 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP11P51784 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP11P51784 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.14□□□□□ -1.43
USP11P51784 ADAM24P-201ENST00000398655 2101 ntBASIC6.14□□□□□ -1.43
USP11P51784 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP11P51784 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP11P51784 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
USP11P51784 AC004158.1-201ENST00000564508 4319 ntBASIC6.14□□□□□ -1.43
USP11P51784 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USP11P51784 OR52B1P-201ENST00000316506 909 ntBASIC6.14□□□□□ -1.43
USP11P51784 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USP11P51784 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.14□□□□□ -1.43
USP11P51784 RNU1-77P-201ENST00000390868 162 ntBASIC6.14□□□□□ -1.43
USP11P51784 RNA5SP339-201ENST00000390987 122 ntBASIC6.14□□□□□ -1.43
USP11P51784 SNORA75.4-201ENST00000391278 119 ntBASIC6.14□□□□□ -1.43
USP11P51784 PPIAP9-201ENST00000403866 498 ntBASIC6.14□□□□□ -1.43
USP11P51784 AL450992.3-201ENST00000413192 568 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms