Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXA1P49639 A2MP1-204ENST00000566278 4130 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 ELL2P3-201ENST00000457883 1602 ntBASIC3.92□□□□□ -1.78
HOXA1P49639 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HOXA1P49639 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 AL391994.1-201ENST00000254724 282 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 AL512646.1-201ENST00000269395 1077 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 RNU6-1066P-201ENST00000363573 105 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 RN7SKP160-201ENST00000363804 340 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 Z97832.1-201ENST00000402490 328 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 AL357515.1-201ENST00000402967 542 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXA1P49639 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AC007559.1-201ENST00000428736 355 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 AL050321.1-201ENST00000432363 400 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 MTCO2P25-201ENST00000447065 681 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 NDUFA5P7-201ENST00000452914 242 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 PNPLA4P1-201ENST00000458328 305 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 AC010307.1-201ENST00000467206 836 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 SYPL1P1-201ENST00000473622 768 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 RN7SL174P-201ENST00000475578 289 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 RPL7L1P13-201ENST00000511702 739 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 IGKV3D-34-201ENST00000522638 302 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXA1P49639 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
HOXA1P49639 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXA1P49639 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXA1P49639 AC012435.1-202ENST00000568772 240 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXA1P49639 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 AC091965.5-201ENST00000624785 342 ntBASIC3.91□□□□□ -1.78
HOXA1P49639 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXA1P49639 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXA1P49639 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXA1P49639 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXA1P49639 AC010300.1-201ENST00000600671 5134 ntBASIC3.9□□□□□ -1.78
HOXA1P49639 AC087359.1-201ENST00000508335 1740 ntBASIC3.9□□□□□ -1.78
HOXA1P49639 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
HOXA1P49639 AC106871.1-201ENST00000568324 3102 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
HOXA1P49639 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HOXA1P49639 RNU6-492P-201ENST00000363035 104 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXA1P49639 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HOXA1P49639 AL080315.1-201ENST00000406055 466 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 RNU2-65P-201ENST00000410162 185 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 RNA5SP345-201ENST00000410646 108 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXA1P49639 TRGV6-201ENST00000417928 299 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 AL022400.1-201ENST00000423946 935 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AL390023.1-201ENST00000428836 262 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 AC010881.1-201ENST00000433830 235 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXA1P49639 RPL12P46-201ENST00000436610 195 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 RPL5P32-201ENST00000454085 879 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 RPS4XP1-201ENST00000482189 787 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXA1P49639 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXA1P49639 COX6B1P5-201ENST00000509843 249 ntBASIC3.9□□□□□ -1.79
HOXA1P49639 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXA1P49639 SNORA48.10-201ENST00000516965 160 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms