Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.35□□□□□ -1.71
CENPAP49450 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CENPAP49450 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
CENPAP49450 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CENPAP49450 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CENPAP49450 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CENPAP49450 XPOTP1-201ENST00000443317 2398 ntBASIC4.34□□□□□ -1.71
CENPAP49450 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CENPAP49450 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.34□□□□□ -1.71
CENPAP49450 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 Y_RNA.25-201ENST00000362528 102 ntBASIC4.34□□□□□ -1.71
CENPAP49450 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.34□□□□□ -1.71
CENPAP49450 AL121978.1-201ENST00000402778 359 ntBASIC4.34□□□□□ -1.71
CENPAP49450 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.34□□□□□ -1.71
CENPAP49450 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 AL355433.1-201ENST00000422804 300 ntBASIC4.34□□□□□ -1.71
CENPAP49450 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 AL365203.2-201ENST00000423444 196 ntBASIC4.34□□□□□ -1.71
CENPAP49450 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 AC008072.1-201ENST00000434254 824 ntBASIC4.34□□□□□ -1.71
CENPAP49450 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 AC104651.2-201ENST00000447549 528 ntBASIC4.34□□□□□ -1.71
CENPAP49450 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 AC010468.1-201ENST00000461022 817 ntBASIC4.34□□□□□ -1.71
CENPAP49450 RPL23AP65-201ENST00000475608 468 ntBASIC4.34□□□□□ -1.71
CENPAP49450 AC012170.1-201ENST00000495139 359 ntBASIC4.34□□□□□ -1.71
CENPAP49450 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.34□□□□□ -1.71
CENPAP49450 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.34□□□□□ -1.71
CENPAP49450 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.34□□□□□ -1.71
CENPAP49450 RNA5SP92-201ENST00000516437 110 ntBASIC4.34□□□□□ -1.71
CENPAP49450 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.34□□□□□ -1.71
CENPAP49450 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.34□□□□□ -1.71
CENPAP49450 TRAV15-201ENST00000556680 249 ntBASIC4.34□□□□□ -1.71
CENPAP49450 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.34□□□□□ -1.71
CENPAP49450 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.34□□□□□ -1.71
CENPAP49450 EIF5A2P1-201ENST00000564027 460 ntBASIC4.34□□□□□ -1.71
CENPAP49450 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.34□□□□□ -1.71
CENPAP49450 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 AC010620.1-201ENST00000601088 1102 ntBASIC4.34□□□□□ -1.71
CENPAP49450 AC006270.3-201ENST00000605967 1036 ntBASIC4.34□□□□□ -1.71
CENPAP49450 AC010424.2-201ENST00000607594 443 ntBASIC4.34□□□□□ -1.71
CENPAP49450 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.34□□□□□ -1.71
CENPAP49450 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.34□□□□□ -1.71
CENPAP49450 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.34□□□□□ -1.71
CENPAP49450 AC026634.1-201ENST00000634369 198 ntBASIC4.34□□□□□ -1.71
CENPAP49450 AC007671.2-201ENST00000637344 619 ntBASIC4.34□□□□□ -1.71
CENPAP49450 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 AP000526.1-201ENST00000603308 1388 ntBASIC4.34□□□□□ -1.71
CENPAP49450 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.34□□□□□ -1.71
CENPAP49450 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 CDR1-202ENST00000625883 1485 ntBASIC4.34□□□□□ -1.71
CENPAP49450 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.34□□□□□ -1.71
CENPAP49450 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CENPAP49450 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.34□□□□□ -1.71
CENPAP49450 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CENPAP49450 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CENPAP49450 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.34□□□□□ -1.72
CENPAP49450 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CENPAP49450 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CENPAP49450 MAPK10-372ENST00000641954 3413 ntBASIC4.34□□□□□ -1.72
CENPAP49450 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.34□□□□□ -1.72
CENPAP49450 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CENPAP49450 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CENPAP49450 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CENPAP49450 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CENPAP49450 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CENPAP49450 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CENPAP49450 AC107081.3-201ENST00000612715 2034 ntBASIC4.33□□□□□ -1.72
CENPAP49450 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.33□□□□□ -1.72
CENPAP49450 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.33□□□□□ -1.72
CENPAP49450 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CENPAP49450 MTCO1P11-201ENST00000429111 1528 ntBASIC4.33□□□□□ -1.72
CENPAP49450 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CENPAP49450 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
CENPAP49450 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CENPAP49450 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CENPAP49450 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CENPAP49450 SNORA51.1-201ENST00000363243 140 ntBASIC4.33□□□□□ -1.72
CENPAP49450 RNU1-85P-201ENST00000364127 164 ntBASIC4.33□□□□□ -1.72
CENPAP49450 RNA5SP428-201ENST00000365129 132 ntBASIC4.33□□□□□ -1.72
CENPAP49450 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.33□□□□□ -1.72
CENPAP49450 RNU5A-2P-201ENST00000384337 116 ntBASIC4.33□□□□□ -1.72
CENPAP49450 RNU6-171P-201ENST00000384354 107 ntBASIC4.33□□□□□ -1.72
CENPAP49450 DSTNP4-201ENST00000399472 474 ntBASIC4.33□□□□□ -1.72
CENPAP49450 SKINT1L-201ENST00000401057 817 ntBASIC4.33□□□□□ -1.72
CENPAP49450 AL592291.1-201ENST00000403830 352 ntBASIC4.33□□□□□ -1.72
CENPAP49450 RNA5SP345-201ENST00000410646 108 ntBASIC4.33□□□□□ -1.72
CENPAP49450 AC008280.1-201ENST00000418851 412 ntBASIC4.33□□□□□ -1.72
CENPAP49450 RPS12P23-201ENST00000419579 400 ntBASIC4.33□□□□□ -1.72
CENPAP49450 AC009237.2-201ENST00000421358 284 ntBASIC4.33□□□□□ -1.72
CENPAP49450 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms