Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.11□□□□□ -1.75
SSR1P43307 MTCO3P22-201ENST00000603219 784 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AL023583.1-201ENST00000607518 1143 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.11□□□□□ -1.75
SSR1P43307 AC135803.1-201ENST00000608748 565 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AC084036.1-201ENST00000609190 508 ntBASIC4.11□□□□□ -1.75
SSR1P43307 AC112484.5-201ENST00000624189 228 ntBASIC4.11□□□□□ -1.75
SSR1P43307 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.11□□□□□ -1.75
SSR1P43307 MIR6830-201ENST00000636015 70 ntBASIC4.11□□□□□ -1.75
SSR1P43307 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SSR1P43307 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSR1P43307 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SSR1P43307 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SSR1P43307 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSR1P43307 SNORA27.3-201ENST00000364937 134 ntBASIC4.1□□□□□ -1.75
SSR1P43307 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSR1P43307 RPL21P65-201ENST00000406094 466 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AL807761.1-201ENST00000417622 171 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AC008065.1-201ENST00000428525 348 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AC023512.1-201ENST00000444513 499 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AL500522.2-201ENST00000448562 343 ntBASIC4.1□□□□□ -1.75
SSR1P43307 RPL21P11-201ENST00000461458 483 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AC146507.1-201ENST00000468335 354 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AC093267.1-201ENST00000489176 961 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AC026979.1-201ENST00000492525 396 ntBASIC4.1□□□□□ -1.75
SSR1P43307 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.1□□□□□ -1.75
SSR1P43307 RPL7P24-201ENST00000493052 752 ntBASIC4.1□□□□□ -1.75
SSR1P43307 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.1□□□□□ -1.75
SSR1P43307 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.1□□□□□ -1.75
SSR1P43307 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.1□□□□□ -1.75
SSR1P43307 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.1□□□□□ -1.75
SSR1P43307 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.1□□□□□ -1.75
SSR1P43307 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSR1P43307 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.1□□□□□ -1.75
SSR1P43307 NOP56P3-201ENST00000549457 385 ntBASIC4.1□□□□□ -1.75
SSR1P43307 TRAV37-201ENST00000553906 342 ntBASIC4.1□□□□□ -1.75
SSR1P43307 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.1□□□□□ -1.75
SSR1P43307 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.1□□□□□ -1.75
SSR1P43307 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.1□□□□□ -1.75
SSR1P43307 AC007342.8-201ENST00000623278 678 ntBASIC4.1□□□□□ -1.75
SSR1P43307 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SSR1P43307 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSR1P43307 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSR1P43307 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSR1P43307 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.09□□□□□ -1.75
SSR1P43307 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSR1P43307 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SSR1P43307 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSR1P43307 RNU6-452P-201ENST00000384406 107 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AL022722.2-201ENST00000402519 180 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AL512504.1-201ENST00000415494 778 ntBASIC4.09□□□□□ -1.75
SSR1P43307 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AL031736.2-201ENST00000426573 787 ntBASIC4.09□□□□□ -1.75
SSR1P43307 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.09□□□□□ -1.75
SSR1P43307 MTND2P21-201ENST00000436242 1042 ntBASIC4.09□□□□□ -1.75
SSR1P43307 HMGN2P20-201ENST00000437531 273 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.09□□□□□ -1.75
SSR1P43307 AC006994.1-201ENST00000438212 839 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.09□□□□□ -1.75
SSR1P43307 RPS17P13-201ENST00000448974 407 ntBASIC4.09□□□□□ -1.75
SSR1P43307 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.09□□□□□ -1.75
SSR1P43307 AC104308.1-201ENST00000454621 333 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.09□□□□□ -1.75
SSR1P43307 RPS7P7-201ENST00000463499 571 ntBASIC4.09□□□□□ -1.75
SSR1P43307 RPS4XP15-201ENST00000489210 795 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.09□□□□□ -1.75
SSR1P43307 AC115085.1-201ENST00000588924 229 ntBASIC4.09□□□□□ -1.75
SSR1P43307 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.09□□□□□ -1.75
SSR1P43307 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.09□□□□□ -1.75
SSR1P43307 AC069304.3-201ENST00000603938 1084 ntBASIC4.09□□□□□ -1.75
SSR1P43307 BRDTP1-201ENST00000605735 677 ntBASIC4.09□□□□□ -1.75
SSR1P43307 RNVU1-4-201ENST00000612985 164 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.09□□□□□ -1.75
SSR1P43307 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.09□□□□□ -1.75
SSR1P43307 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.09□□□□□ -1.75
SSR1P43307 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SSR1P43307 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SSR1P43307 DDX6P1-205ENST00000441966 1436 ntBASIC4.09□□□□□ -1.75
SSR1P43307 MAPK10-362ENST00000641864 4484 ntBASIC4.09□□□□□ -1.75
SSR1P43307 AL353743.4-201ENST00000422653 1547 ntBASIC4.09□□□□□ -1.75
SSR1P43307 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SSR1P43307 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.08□□□□□ -1.76
SSR1P43307 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSR1P43307 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SSR1P43307 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SSR1P43307 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSR1P43307 RNA5SP97-201ENST00000365006 84 ntBASIC4.08□□□□□ -1.76
SSR1P43307 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSR1P43307 RNU6-185P-201ENST00000384421 107 ntBASIC4.08□□□□□ -1.76
SSR1P43307 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSR1P43307 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.08□□□□□ -1.76
SSR1P43307 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.08□□□□□ -1.76
SSR1P43307 RPL31P12-201ENST00000422587 358 ntBASIC4.08□□□□□ -1.76
SSR1P43307 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.08□□□□□ -1.76
SSR1P43307 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.08□□□□□ -1.76
SSR1P43307 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.08□□□□□ -1.76
SSR1P43307 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.08□□□□□ -1.76
SSR1P43307 RSL24D1P2-201ENST00000445584 366 ntBASIC4.08□□□□□ -1.76
SSR1P43307 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms