Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 RPEP2-201ENST00000432149 701 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC011998.1-201ENST00000433403 117 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC004854.1-201ENST00000440356 349 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC104306.1-201ENST00000449702 371 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 ABCF2P2-201ENST00000450549 296 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC010307.1-201ENST00000467206 836 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC006463.2-201ENST00000473326 348 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HNF4AP41235 AC104982.1-201ENST00000478775 574 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC005726.1-201ENST00000494679 427 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.21□□□□□ -1.74
HNF4AP41235 RNU6-416P-201ENST00000516265 103 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.21□□□□□ -1.74
HNF4AP41235 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.21□□□□□ -1.74
HNF4AP41235 OR8K4P-201ENST00000534608 872 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.21□□□□□ -1.74
HNF4AP41235 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.21□□□□□ -1.74
HNF4AP41235 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.21□□□□□ -1.74
HNF4AP41235 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.21□□□□□ -1.74
HNF4AP41235 BPTFP1-201ENST00000579209 492 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 RN7SL339P-201ENST00000580597 296 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 AC063944.3-201ENST00000609969 533 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HNF4AP41235 AC008759.3-201ENST00000613300 508 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 FP325313.1-201ENST00000638228 703 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HNF4AP41235 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HNF4AP41235 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HNF4AP41235 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
HNF4AP41235 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HNF4AP41235 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HNF4AP41235 AL627171.1-201ENST00000618845 1308 ntBASIC4.21□□□□□ -1.74
HNF4AP41235 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.2□□□□□ -1.74
HNF4AP41235 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HNF4AP41235 OR5P1P-201ENST00000299512 925 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 MIR331-201ENST00000362302 94 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 SNORD74.4-201ENST00000364129 80 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.2□□□□□ -1.74
HNF4AP41235 RPL22P22-201ENST00000395439 379 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HNF4AP41235 RPS4XP9-201ENST00000405151 780 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 RPS23P10-201ENST00000416185 486 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AC246680.2-201ENST00000422106 389 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AL356387.2-201ENST00000422272 243 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.2□□□□□ -1.74
HNF4AP41235 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 NANOGP6-201ENST00000429190 847 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 PRELID3BP10-201ENST00000431957 584 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HNF4AP41235 AC006994.1-201ENST00000438212 839 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.2□□□□□ -1.74
HNF4AP41235 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.2□□□□□ -1.74
HNF4AP41235 NPM1P49-201ENST00000448027 714 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.2□□□□□ -1.74
HNF4AP41235 OFD1P3Y-201ENST00000453312 783 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.2□□□□□ -1.74
HNF4AP41235 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.2□□□□□ -1.74
HNF4AP41235 RPL35AP15-201ENST00000468042 339 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AC092451.1-201ENST00000480211 153 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 NCOR1P1-202ENST00000486162 291 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HNF4AP41235 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HNF4AP41235 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.2□□□□□ -1.74
HNF4AP41235 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HNF4AP41235 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HNF4AP41235 AC005798.1-201ENST00000513715 387 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HNF4AP41235 AC104057.1-201ENST00000515547 497 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 RNA5SP73-201ENST00000516744 108 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.2□□□□□ -1.74
HNF4AP41235 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.2□□□□□ -1.74
HNF4AP41235 AGGF1P8-201ENST00000562979 1000 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.2□□□□□ -1.74
HNF4AP41235 AC006116.5-201ENST00000591936 559 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AC112230.1-201ENST00000604342 547 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.2□□□□□ -1.74
HNF4AP41235 MIR6748-201ENST00000610433 71 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HNF4AP41235 AC105227.2-201ENST00000615075 605 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AL021997.2-201ENST00000615674 271 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 uc_338.13-201ENST00000618243 179 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 AC006927.4-201ENST00000639187 543 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HNF4AP41235 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
HNF4AP41235 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.2□□□□□ -1.74
HNF4AP41235 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HNF4AP41235 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HNF4AP41235 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.19□□□□□ -1.74
HNF4AP41235 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.19□□□□□ -1.74
HNF4AP41235 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
HNF4AP41235 RNA5SP175-201ENST00000364275 119 ntBASIC4.19□□□□□ -1.74
HNF4AP41235 SNORA56-201ENST00000383966 129 ntBASIC4.19□□□□□ -1.74
HNF4AP41235 SFR1P1-201ENST00000403720 688 ntBASIC4.19□□□□□ -1.74
HNF4AP41235 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.19□□□□□ -1.74
HNF4AP41235 SNORA11F-201ENST00000408237 128 ntBASIC4.19□□□□□ -1.74
HNF4AP41235 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.19□□□□□ -1.74
HNF4AP41235 OR51A3P-201ENST00000413596 924 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms