Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL356535.1-201ENST00000440335 398 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC017099.1-201ENST00000448261 1028 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTNNA1P35221 MTND2P28-201ENST00000457540 1044 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 NF1P3-201ENST00000457709 450 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 RN7SL610P-201ENST00000463845 291 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AC109327.1-201ENST00000471666 403 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 RPL31P61-201ENST00000496160 376 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC093824.1-201ENST00000508796 343 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 SNORA26.10-201ENST00000516427 141 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 IGLVIV-53-201ENST00000520107 367 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC107954.1-201ENST00000565906 727 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AC079171.1-201ENST00000568788 914 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AC074051.3-201ENST00000570238 358 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC104662.1-201ENST00000604448 511 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AL390816.3-201ENST00000604527 1066 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC128687.2-201ENST00000609657 566 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 Mico1.1-201ENST00000611698 204 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AC100827.5-201ENST00000615883 426 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AL773545.4-201ENST00000637262 310 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 AL513478.4-201ENST00000641636 310 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.34□□□□□ -1.71
CTNNA1P35221 AC027287.1-201ENST00000553115 1453 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 ZNF734P-201ENST00000419494 1534 ntBASIC4.34□□□□□ -1.71
CTNNA1P35221 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
CTNNA1P35221 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CTNNA1P35221 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.34□□□□□ -1.72
CTNNA1P35221 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNA1P35221 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.34□□□□□ -1.72
CTNNA1P35221 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CTNNA1P35221 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA1P35221 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA1P35221 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA1P35221 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA1P35221 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA1P35221 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA1P35221 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA1P35221 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CTNNA1P35221 RNA5SP322-201ENST00000363617 119 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 RNU1-85P-201ENST00000364127 164 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 RNU6-468P-201ENST00000384003 109 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 RNU6-921P-201ENST00000384361 107 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AL121972.1-201ENST00000402023 252 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 MTCO3P31-201ENST00000405526 789 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 RNU2-37P-201ENST00000410695 177 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 RAC1P3-201ENST00000416129 580 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA1P35221 RPL23AP46-201ENST00000438548 490 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 CEACAMP9-201ENST00000442990 513 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AL050341.1-201ENST00000447743 313 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA1P35221 Z99714.1-201ENST00000450463 807 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.33□□□□□ -1.72
CTNNA1P35221 RNA5SP246-201ENST00000458909 119 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 RNU7-140P-201ENST00000459546 60 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 SYPL1P1-201ENST00000473622 768 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 TMED11P-201ENST00000479478 690 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AC008958.1-201ENST00000511047 682 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AC119751.1-201ENST00000513357 765 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 IGKV2D-36-201ENST00000518643 226 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AP001207.1-201ENST00000524051 481 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 MTCYBP41-201ENST00000528913 1123 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AC105233.3-201ENST00000531125 744 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA1P35221 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA1P35221 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.33□□□□□ -1.72
CTNNA1P35221 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.33□□□□□ -1.72
CTNNA1P35221 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA1P35221 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA1P35221 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA1P35221 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.33□□□□□ -1.72
CTNNA1P35221 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.33□□□□□ -1.72
CTNNA1P35221 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.33□□□□□ -1.72
CTNNA1P35221 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CTNNA1P35221 EXOC5P1-201ENST00000510543 1969 ntBASIC4.33□□□□□ -1.72
CTNNA1P35221 FAM35DP-201ENST00000323387 2712 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNA1P35221 LINC02471-203ENST00000641941 4752 ntBASIC4.32□□□□□ -1.72
CTNNA1P35221 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTNNA1P35221 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms