Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
HOXD11P31277 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
HOXD11P31277 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 HRH4-201ENST00000256906 3668 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 AC005261.2-201ENST00000593427 4258 ntBASIC8.53□□□□□ -1.04
HOXD11P31277 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.53□□□□□ -1.04
HOXD11P31277 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
HOXD11P31277 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
HOXD11P31277 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
HOXD11P31277 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC8.52□□□□□ -1.04
HOXD11P31277 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC8.52□□□□□ -1.04
HOXD11P31277 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.52□□□□□ -1.04
HOXD11P31277 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC8.52□□□□□ -1.04
HOXD11P31277 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC8.52□□□□□ -1.04
HOXD11P31277 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
HOXD11P31277 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.04
HOXD11P31277 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.52□□□□□ -1.05
HOXD11P31277 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC8.52□□□□□ -1.05
HOXD11P31277 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 AL031123.2-201ENST00000563225 3325 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 RMRP-202ENST00000363046 264 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 RNU6-309P-201ENST00000364573 106 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 GCNT1P4-201ENST00000404096 329 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 MIR1263-201ENST00000408324 86 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 AC074117.2-201ENST00000417130 397 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 PPIAP23-201ENST00000420099 497 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC8.52□□□□□ -1.05
HOXD11P31277 AC097463.1-201ENST00000447288 481 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 AC107385.1-201ENST00000507985 778 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC8.52□□□□□ -1.05
HOXD11P31277 AC117383.2-201ENST00000514722 322 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 SNORA31.19-201ENST00000517079 126 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 AP000620.1-201ENST00000527147 504 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 TOMM20P1-201ENST00000534518 427 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8.52□□□□□ -1.05
HOXD11P31277 MIR4443-201ENST00000585052 53 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 IPO5P1-202ENST00000600039 287 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 RN7SL113P-201ENST00000619959 299 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 IGHV3-54-201ENST00000622166 353 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 AL353807.3-201ENST00000500626 2505 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 AC022336.2-201ENST00000568966 2538 ntBASIC8.52□□□□□ -1.05
HOXD11P31277 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 NSMAF-201ENST00000038176 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
HOXD11P31277 VIT-202ENST00000379242 2810 ntAPPRIS P3 TSL 2 BASIC8.52□□□□□ -1.05
HOXD11P31277 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.52□□□□□ -1.05
HOXD11P31277 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
HOXD11P31277 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXD11P31277 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 AC138409.1-201ENST00000505001 3598 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXD11P31277 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXD11P31277 SNORA73A-201ENST00000364938 206 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 AC093392.1-201ENST00000366280 340 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 RNU6-793P-201ENST00000384233 104 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 CRIP1P3-201ENST00000416794 220 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 RPL17P36-201ENST00000420302 549 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 MTATP8P2-201ENST00000435212 202 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 AP000936.3-201ENST00000438127 255 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 AC242426.2-201ENST00000446956 795 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXD11P31277 KF459542.1-201ENST00000450908 553 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 RPLP0P1-201ENST00000457002 361 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 IGLV7-35-201ENST00000523314 340 ntBASIC8.51□□□□□ -1.05
HOXD11P31277 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.51□□□□□ -1.05
HOXD11P31277 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.51□□□□□ -1.05
HOXD11P31277 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
HOXD11P31277 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
HOXD11P31277 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms