Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MFSD13B-201ENST00000420133 1290 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC13P31276 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC13P31276 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC13P31276 OR4F13P-201ENST00000428478 931 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 SKP1P3-201ENST00000429280 487 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 YWHAEP5-201ENST00000431545 765 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AL138799.3-201ENST00000438968 350 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 RPS29P7-201ENST00000439662 171 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC13P31276 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 HSFY6P-201ENST00000445573 403 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 AC008280.2-201ENST00000455473 307 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC005008.1-201ENST00000456151 612 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC073522.1-201ENST00000483312 377 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 RN7SL691P-201ENST00000494487 301 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC082651.2-201ENST00000496833 166 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC078918.1-201ENST00000498515 228 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC13P31276 AC021146.3-201ENST00000511911 260 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC110760.3-202ENST00000515177 371 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC13P31276 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC13P31276 RN7SL703P-201ENST00000578485 302 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC007566.2-201ENST00000603642 413 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC024220.1-201ENST00000603675 484 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.48□□□□□ -1.69
HOXC13P31276 AC091488.1-201ENST00000604239 660 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AL354984.3-201ENST00000604803 325 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AL021997.2-201ENST00000615674 271 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC006249.1-201ENST00000621223 471 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AP000943.4-201ENST00000622912 357 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC13P31276 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HOXC13P31276 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.48□□□□□ -1.69
HOXC13P31276 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC13P31276 AL627171.1-201ENST00000618845 1308 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HOXC13P31276 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC13P31276 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC13P31276 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
HOXC13P31276 IL6STP1-201ENST00000346911 1020 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 RNA5SP130-201ENST00000364431 114 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 RNU6-628P-201ENST00000410675 107 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 CYCSP19-201ENST00000411715 316 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC13P31276 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC13P31276 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC13P31276 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC13P31276 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC13P31276 HSFY3P-201ENST00000444242 1191 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 ABCF2P2-201ENST00000450549 296 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC13P31276 GTF2IP12-201ENST00000456547 356 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 RPS4XP6-201ENST00000477670 797 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC13P31276 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC13P31276 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC13P31276 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC13P31276 NDUFB4P9-201ENST00000511646 388 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 RNU6-488P-201ENST00000515918 99 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 RNA5SP73-201ENST00000516744 108 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AC008694.2-201ENST00000517591 306 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.47□□□□□ -1.69
HOXC13P31276 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC13P31276 AC018926.1-201ENST00000616335 435 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AC078880.5-201ENST00000617845 421 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AP000484.1-201ENST00000620067 1252 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AC009269.6-201ENST00000621778 588 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AC068880.4-201ENST00000623082 495 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AC093875.1-201ENST00000623688 504 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 AC106858.1-201ENST00000637497 429 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 AC066616.2-201ENST00000559334 1481 ntBASIC4.47□□□□□ -1.69
HOXC13P31276 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC13P31276 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC13P31276 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HOXC13P31276 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.47□□□□□ -1.69
HOXC13P31276 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.47□□□□□ -1.69
HOXC13P31276 AC073055.1-201ENST00000456901 1621 ntBASIC4.46□□□□□ -1.69
HOXC13P31276 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXC13P31276 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC13P31276 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC13P31276 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXC13P31276 MTCO1P6-201ENST00000481192 1384 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms