Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLIP1P30622 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP1P30622 ETF1P3-201ENST00000430422 1160 ntBASIC5.2□□□□□ -1.58
CLIP1P30622 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP1P30622 AC020893.1-201ENST00000502452 580 ntBASIC5.2□□□□□ -1.58
CLIP1P30622 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.2□□□□□ -1.58
CLIP1P30622 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.2□□□□□ -1.58
CLIP1P30622 uc_338.32-201ENST00000615087 172 ntBASIC5.2□□□□□ -1.58
CLIP1P30622 AC110801.1-201ENST00000623590 212 ntBASIC5.2□□□□□ -1.58
CLIP1P30622 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.2□□□□□ -1.58
CLIP1P30622 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLIP1P30622 AC104297.1-201ENST00000393779 870 ntBASIC5.19□□□□□ -1.58
CLIP1P30622 RN7SL863P-201ENST00000462370 296 ntBASIC5.19□□□□□ -1.58
CLIP1P30622 AC113430.1-201ENST00000506872 718 ntBASIC5.19□□□□□ -1.58
CLIP1P30622 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.19□□□□□ -1.58
CLIP1P30622 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLIP1P30622 AC015917.1-201ENST00000579654 510 ntBASIC5.19□□□□□ -1.58
CLIP1P30622 AL034351.1-201ENST00000605288 668 ntBASIC5.19□□□□□ -1.58
CLIP1P30622 AL122125.1-201ENST00000616999 600 ntBASIC5.19□□□□□ -1.58
CLIP1P30622 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.19□□□□□ -1.58
CLIP1P30622 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP1P30622 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP1P30622 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP1P30622 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP1P30622 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.18□□□□□ -1.58
CLIP1P30622 RPL30P2-201ENST00000414021 291 ntBASIC5.18□□□□□ -1.58
CLIP1P30622 AC236972.1-201ENST00000433225 199 ntBASIC5.18□□□□□ -1.58
CLIP1P30622 S100A11P2-201ENST00000467589 312 ntBASIC5.18□□□□□ -1.58
CLIP1P30622 RPS3AP43-201ENST00000479743 781 ntBASIC5.18□□□□□ -1.58
CLIP1P30622 AC080014.1-201ENST00000496877 1201 ntBASIC5.18□□□□□ -1.58
CLIP1P30622 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.18□□□□□ -1.58
CLIP1P30622 RN7SKP116-201ENST00000516902 319 ntBASIC5.18□□□□□ -1.58
CLIP1P30622 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.18□□□□□ -1.58
CLIP1P30622 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.18□□□□□ -1.58
CLIP1P30622 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.18□□□□□ -1.58
CLIP1P30622 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CLIP1P30622 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLIP1P30622 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.18□□□□□ -1.58
CLIP1P30622 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLIP1P30622 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP1P30622 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.17□□□□□ -1.58
CLIP1P30622 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP1P30622 RNU1-140P-201ENST00000365040 165 ntBASIC5.17□□□□□ -1.58
CLIP1P30622 SNORA54-201ENST00000384281 123 ntBASIC5.17□□□□□ -1.58
CLIP1P30622 Y_RNA.510-201ENST00000384511 114 ntBASIC5.17□□□□□ -1.58
CLIP1P30622 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLIP1P30622 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.17□□□□□ -1.58
CLIP1P30622 TMED11P-201ENST00000479478 690 ntBASIC5.17□□□□□ -1.58
CLIP1P30622 ARL2BPP6-201ENST00000512757 439 ntBASIC5.17□□□□□ -1.58
CLIP1P30622 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLIP1P30622 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CLIP1P30622 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC5.16□□□□□ -1.58
CLIP1P30622 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.16□□□□□ -1.58
CLIP1P30622 RNU4-44P-201ENST00000363050 141 ntBASIC5.16□□□□□ -1.58
CLIP1P30622 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.16□□□□□ -1.58
CLIP1P30622 MIR1289-1-201ENST00000408836 144 ntBASIC5.16□□□□□ -1.58
CLIP1P30622 RPL12P26-201ENST00000452430 487 ntBASIC5.16□□□□□ -1.58
CLIP1P30622 MIR2114-201ENST00000516645 80 ntBASIC5.16□□□□□ -1.58
CLIP1P30622 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.16□□□□□ -1.58
CLIP1P30622 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.16□□□□□ -1.58
CLIP1P30622 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.16□□□□□ -1.58
CLIP1P30622 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.16□□□□□ -1.58
CLIP1P30622 AC099654.11-201ENST00000638857 294 ntBASIC5.16□□□□□ -1.58
CLIP1P30622 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.16□□□□□ -1.58
CLIP1P30622 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CLIP1P30622 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CLIP1P30622 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CLIP1P30622 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.16□□□□□ -1.58
CLIP1P30622 SNORA7.4-201ENST00000384249 137 ntBASIC5.15□□□□□ -1.58
CLIP1P30622 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.15□□□□□ -1.58
CLIP1P30622 RPL23AP69-201ENST00000431134 458 ntBASIC5.15□□□□□ -1.58
CLIP1P30622 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC5.15□□□□□ -1.58
CLIP1P30622 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.15□□□□□ -1.58
CLIP1P30622 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.15□□□□□ -1.58
CLIP1P30622 AC011825.1-201ENST00000484967 388 ntBASIC5.15□□□□□ -1.58
CLIP1P30622 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.15□□□□□ -1.58
CLIP1P30622 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CLIP1P30622 AC024224.1-201ENST00000538284 609 ntBASIC5.15□□□□□ -1.58
CLIP1P30622 uc_338.25-201ENST00000613756 156 ntBASIC5.15□□□□□ -1.58
CLIP1P30622 MIR6852-201ENST00000621699 66 ntBASIC5.15□□□□□ -1.58
CLIP1P30622 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP1P30622 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.14□□□□□ -1.59
CLIP1P30622 RNU6-55P-201ENST00000411092 107 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 RNU6-954P-201ENST00000411355 107 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 AC002524.1-201ENST00000411687 547 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 AC009263.1-201ENST00000441193 1239 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 UBE2DNL-203ENST00000474922 222 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 FTH1P9-201ENST00000513251 355 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 AC006518.1-201ENST00000541449 943 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.14□□□□□ -1.59
CLIP1P30622 LARP7P3-201ENST00000579888 337 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 MIR4513-201ENST00000581077 86 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 AC241377.1-201ENST00000619797 406 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP1P30622 AC006386.2-201ENST00000624491 75 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 AC012005.1-201ENST00000624575 75 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP1P30622 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CLIP1P30622 AC007496.3-201ENST00000624987 3443 ntBASIC5.14□□□□□ -1.59
CLIP1P30622 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms