Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SNORA11C-201ENST00000408532 129 ntBASIC3.61□□□□□ -1.83
NCK1P16333 ELOCP19-201ENST00000411919 318 ntBASIC3.61□□□□□ -1.83
NCK1P16333 RPL30P2-201ENST00000414021 291 ntBASIC3.61□□□□□ -1.83
NCK1P16333 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.61□□□□□ -1.83
NCK1P16333 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NCK1P16333 RPL23AP38-201ENST00000423801 469 ntBASIC3.61□□□□□ -1.83
NCK1P16333 VN1R42P-201ENST00000424651 344 ntBASIC3.61□□□□□ -1.83
NCK1P16333 AC002075.2-201ENST00000425207 252 ntBASIC3.61□□□□□ -1.83
NCK1P16333 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.61□□□□□ -1.83
NCK1P16333 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.61□□□□□ -1.83
NCK1P16333 RPL23AP33-201ENST00000442301 452 ntBASIC3.61□□□□□ -1.83
NCK1P16333 RPS26P56-201ENST00000444468 240 ntBASIC3.61□□□□□ -1.83
NCK1P16333 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.61□□□□□ -1.83
NCK1P16333 MTND2P30-201ENST00000456663 382 ntBASIC3.61□□□□□ -1.83
NCK1P16333 RN7SL303P-201ENST00000469773 251 ntBASIC3.61□□□□□ -1.83
NCK1P16333 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NCK1P16333 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.61□□□□□ -1.83
NCK1P16333 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.61□□□□□ -1.83
NCK1P16333 RPS27AP13-201ENST00000498403 237 ntBASIC3.61□□□□□ -1.83
NCK1P16333 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.61□□□□□ -1.83
NCK1P16333 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.61□□□□□ -1.83
NCK1P16333 AC104108.1-201ENST00000509930 412 ntBASIC3.61□□□□□ -1.83
NCK1P16333 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.61□□□□□ -1.83
NCK1P16333 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.61□□□□□ -1.83
NCK1P16333 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.61□□□□□ -1.83
NCK1P16333 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.61□□□□□ -1.83
NCK1P16333 AC091516.1-201ENST00000549191 703 ntBASIC3.61□□□□□ -1.83
NCK1P16333 CR383656.6-201ENST00000550518 394 ntBASIC3.61□□□□□ -1.83
NCK1P16333 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.61□□□□□ -1.83
NCK1P16333 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.61□□□□□ -1.83
NCK1P16333 ZNF92P2-201ENST00000600543 1059 ntBASIC3.61□□□□□ -1.83
NCK1P16333 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.61□□□□□ -1.83
NCK1P16333 AC114781.5-201ENST00000615297 108 ntBASIC3.61□□□□□ -1.83
NCK1P16333 AL163051.2-201ENST00000618976 735 ntBASIC3.61□□□□□ -1.83
NCK1P16333 AC073569.3-201ENST00000619055 682 ntBASIC3.61□□□□□ -1.83
NCK1P16333 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NCK1P16333 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.61□□□□□ -1.83
NCK1P16333 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.61□□□□□ -1.83
NCK1P16333 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NCK1P16333 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.61□□□□□ -1.83
NCK1P16333 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NCK1P16333 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NCK1P16333 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NCK1P16333 MTCO1P6-201ENST00000481192 1384 ntBASIC3.61□□□□□ -1.83
NCK1P16333 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NCK1P16333 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NCK1P16333 RNU6-796P-201ENST00000391086 107 ntBASIC3.6□□□□□ -1.83
NCK1P16333 U3.22-201ENST00000391120 215 ntBASIC3.6□□□□□ -1.83
NCK1P16333 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCK1P16333 RN7SKP33-201ENST00000410942 340 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.6□□□□□ -1.83
NCK1P16333 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.6□□□□□ -1.83
NCK1P16333 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.6□□□□□ -1.83
NCK1P16333 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.6□□□□□ -1.83
NCK1P16333 MOB1AP1-201ENST00000430903 535 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AL513175.1-201ENST00000431492 780 ntBASIC3.6□□□□□ -1.83
NCK1P16333 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.6□□□□□ -1.83
NCK1P16333 ELOCP3-201ENST00000439303 348 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.6□□□□□ -1.83
NCK1P16333 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 snoU13.1-201ENST00000459157 104 ntBASIC3.6□□□□□ -1.83
NCK1P16333 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 AC106872.2-201ENST00000494303 480 ntBASIC3.6□□□□□ -1.83
NCK1P16333 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.6□□□□□ -1.83
NCK1P16333 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCK1P16333 AC093755.1-201ENST00000512950 1023 ntBASIC3.6□□□□□ -1.83
NCK1P16333 RN7SKP209-201ENST00000516888 304 ntBASIC3.6□□□□□ -1.83
NCK1P16333 SOD1P3-201ENST00000518682 454 ntBASIC3.6□□□□□ -1.83
NCK1P16333 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.6□□□□□ -1.83
NCK1P16333 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.6□□□□□ -1.83
NCK1P16333 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 YPEL5P3-201ENST00000547227 352 ntBASIC3.6□□□□□ -1.83
NCK1P16333 SNRPGP1-201ENST00000553864 222 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.6□□□□□ -1.83
NCK1P16333 AC095057.3-201ENST00000567102 1157 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.6□□□□□ -1.83
NCK1P16333 AC006116.5-201ENST00000591936 559 ntBASIC3.6□□□□□ -1.83
NCK1P16333 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCK1P16333 Z82195.1-201ENST00000604558 398 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AL137849.1-201ENST00000604767 169 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AL121890.3-201ENST00000618494 516 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AC079684.1-201ENST00000621405 437 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AC011944.2-201ENST00000624440 683 ntBASIC3.6□□□□□ -1.83
NCK1P16333 AC010608.2-201ENST00000624830 470 ntBASIC3.6□□□□□ -1.83
NCK1P16333 MIR3653-201ENST00000625572 110 ntBASIC3.6□□□□□ -1.83
NCK1P16333 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NCK1P16333 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NCK1P16333 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCK1P16333 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
NCK1P16333 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NCK1P16333 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
NCK1P16333 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NCK1P16333 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.59□□□□□ -1.83
NCK1P16333 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms