Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC124068.1-201ENST00000563131 678 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC067959.1-201ENST00000604334 379 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC113194.1-201ENST00000606037 500 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC091046.2-201ENST00000620775 665 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC091905.2-201ENST00000623143 306 ntBASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAB40ALP0C0E4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 Y_RNA.126-201ENST00000363382 111 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AL078604.1-201ENST00000404609 466 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AL139098.1-201ENST00000407291 389 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 MTATP6P20-201ENST00000414147 562 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 OR4K6P-201ENST00000416478 897 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 Z75741.2-201ENST00000417272 1167 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 RPL36P19-201ENST00000430744 301 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 UBE2V1P1-201ENST00000430836 445 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 RPL23AP52-201ENST00000439311 478 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 UBE2V1P3-201ENST00000439651 417 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 HSFY6P-201ENST00000445573 403 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC018635.1-201ENST00000468292 1030 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 RN7SL691P-201ENST00000494487 301 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AL592156.1-201ENST00000508758 304 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC093824.1-201ENST00000508796 343 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 ATP1B1P1-201ENST00000509767 915 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 RNU6-885P-201ENST00000516607 104 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 HMGB3P26-201ENST00000560051 582 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 MIR4504-201ENST00000577413 92 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC093227.2-201ENST00000589357 285 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 VN1R85P-201ENST00000601587 426 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC090181.2-201ENST00000602975 672 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AL354760.1-201ENST00000608357 643 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC024941.1-201ENST00000612250 334 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AP006248.2-201ENST00000623309 592 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC090506.2-201ENST00000624521 419 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 AC068620.4-201ENST00000636730 1182 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 Z73965.1-201ENST00000623412 2297 ntBASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
RAB40ALP0C0E4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 AC007390.2-201ENST00000606229 3803 ntBASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 RNU6-582P-201ENST00000362989 107 ntBASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 RNA5SP175-201ENST00000364275 119 ntBASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 Y_RNA.472-201ENST00000384322 102 ntBASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 AL121834.1-202ENST00000404494 277 ntBASIC4.09□□□□□ -1.75
RAB40ALP0C0E4 RNU2-21P-201ENST00000410368 188 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms