Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RB1P06400 SNORA71.3-201ENST00000362582 128 ntBASIC4.56□□□□□ -1.68
RB1P06400 RNU1-83P-201ENST00000363426 164 ntBASIC4.56□□□□□ -1.68
RB1P06400 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.56□□□□□ -1.68
RB1P06400 SNORA72.3-201ENST00000365074 132 ntBASIC4.56□□□□□ -1.68
RB1P06400 RNU6-619P-201ENST00000365146 108 ntBASIC4.56□□□□□ -1.68
RB1P06400 MIR708-201ENST00000390708 88 ntBASIC4.56□□□□□ -1.68
RB1P06400 AL583835.1-201ENST00000399570 407 ntBASIC4.56□□□□□ -1.68
RB1P06400 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
RB1P06400 AC097374.1-203ENST00000400783 485 ntBASIC4.56□□□□□ -1.68
RB1P06400 MIR921-201ENST00000401133 56 ntBASIC4.56□□□□□ -1.68
RB1P06400 MTCO1P56-201ENST00000401674 224 ntBASIC4.56□□□□□ -1.68
RB1P06400 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.56□□□□□ -1.68
RB1P06400 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RB1P06400 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
RB1P06400 RPS12P5-201ENST00000423449 371 ntBASIC4.56□□□□□ -1.68
RB1P06400 OSTCP5-201ENST00000425293 453 ntBASIC4.56□□□□□ -1.68
RB1P06400 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.56□□□□□ -1.68
RB1P06400 RPL21P91-201ENST00000429231 479 ntBASIC4.56□□□□□ -1.68
RB1P06400 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.56□□□□□ -1.68
RB1P06400 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.56□□□□□ -1.68
RB1P06400 GTF2IP3-201ENST00000433887 494 ntBASIC4.56□□□□□ -1.68
RB1P06400 MTCYBP42-201ENST00000444653 1130 ntBASIC4.56□□□□□ -1.68
RB1P06400 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.56□□□□□ -1.68
RB1P06400 AL133547.1-201ENST00000448546 220 ntBASIC4.56□□□□□ -1.68
RB1P06400 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.56□□□□□ -1.68
RB1P06400 RPL23AP15-201ENST00000450202 459 ntBASIC4.56□□□□□ -1.68
RB1P06400 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.56□□□□□ -1.68
RB1P06400 DDX39BP2-208ENST00000453923 258 ntBASIC4.56□□□□□ -1.68
RB1P06400 RNA5SP246-201ENST00000458909 119 ntBASIC4.56□□□□□ -1.68
RB1P06400 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.56□□□□□ -1.68
RB1P06400 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.56□□□□□ -1.68
RB1P06400 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.56□□□□□ -1.68
RB1P06400 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.56□□□□□ -1.68
RB1P06400 RNU6-415P-201ENST00000516252 97 ntBASIC4.56□□□□□ -1.68
RB1P06400 HIGD1AP6-201ENST00000521833 279 ntBASIC4.56□□□□□ -1.68
RB1P06400 DEFB130C-202ENST00000530001 230 ntBASIC4.56□□□□□ -1.68
RB1P06400 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.56□□□□□ -1.68
RB1P06400 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RB1P06400 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.56□□□□□ -1.68
RB1P06400 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.56□□□□□ -1.68
RB1P06400 MIR4509-3-201ENST00000578671 94 ntBASIC4.56□□□□□ -1.68
RB1P06400 RN7SL339P-201ENST00000580597 296 ntBASIC4.56□□□□□ -1.68
RB1P06400 MIR4509-2-201ENST00000583920 94 ntBASIC4.56□□□□□ -1.68
RB1P06400 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.56□□□□□ -1.68
RB1P06400 AL606490.9-201ENST00000603331 271 ntBASIC4.56□□□□□ -1.68
RB1P06400 SNORD91B-202ENST00000608459 222 ntBASIC4.56□□□□□ -1.68
RB1P06400 AP000238.1-201ENST00000608759 426 ntBASIC4.56□□□□□ -1.68
RB1P06400 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.56□□□□□ -1.68
RB1P06400 MIR4509-1-201ENST00000618224 94 ntBASIC4.56□□□□□ -1.68
RB1P06400 AC039056.2-201ENST00000622261 511 ntBASIC4.56□□□□□ -1.68
RB1P06400 AC091905.2-201ENST00000623143 306 ntBASIC4.56□□□□□ -1.68
RB1P06400 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.56□□□□□ -1.68
RB1P06400 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RB1P06400 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RB1P06400 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
RB1P06400 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RB1P06400 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
RB1P06400 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.55□□□□□ -1.68
RB1P06400 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.55□□□□□ -1.68
RB1P06400 XPOTP1-201ENST00000443317 2398 ntBASIC4.55□□□□□ -1.68
RB1P06400 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RB1P06400 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.55□□□□□ -1.68
RB1P06400 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RB1P06400 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
RB1P06400 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.55□□□□□ -1.68
RB1P06400 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RB1P06400 RPL17P50-201ENST00000396131 546 ntBASIC4.55□□□□□ -1.68
RB1P06400 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.55□□□□□ -1.68
RB1P06400 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.55□□□□□ -1.68
RB1P06400 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.55□□□□□ -1.68
RB1P06400 AL449283.1-202ENST00000418249 604 ntBASIC4.55□□□□□ -1.68
RB1P06400 C1DP1-201ENST00000426049 402 ntBASIC4.55□□□□□ -1.68
RB1P06400 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.55□□□□□ -1.68
RB1P06400 AC105402.2-201ENST00000438503 358 ntBASIC4.55□□□□□ -1.68
RB1P06400 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.55□□□□□ -1.68
RB1P06400 AC073587.1-201ENST00000447093 876 ntBASIC4.55□□□□□ -1.68
RB1P06400 RPL7P15-201ENST00000461190 712 ntBASIC4.55□□□□□ -1.68
RB1P06400 AC108751.2-201ENST00000469993 231 ntBASIC4.55□□□□□ -1.68
RB1P06400 AC079203.1-201ENST00000487972 404 ntBASIC4.55□□□□□ -1.68
RB1P06400 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.55□□□□□ -1.68
RB1P06400 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.55□□□□□ -1.68
RB1P06400 HMGB3P13-201ENST00000511263 607 ntBASIC4.55□□□□□ -1.68
RB1P06400 TCP11X3P-202ENST00000514289 1254 ntBASIC4.55□□□□□ -1.68
RB1P06400 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.55□□□□□ -1.68
RB1P06400 IGKV2-23-201ENST00000518729 323 ntBASIC4.55□□□□□ -1.68
RB1P06400 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.55□□□□□ -1.68
RB1P06400 MTCO3P15-201ENST00000526563 574 ntBASIC4.55□□□□□ -1.68
RB1P06400 HSPE1P5-201ENST00000561489 272 ntBASIC4.55□□□□□ -1.68
RB1P06400 MIR5685-201ENST00000579080 79 ntBASIC4.55□□□□□ -1.68
RB1P06400 MIR4666A-201ENST00000580160 79 ntBASIC4.55□□□□□ -1.68
RB1P06400 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.55□□□□□ -1.68
RB1P06400 AL020997.3-201ENST00000602843 359 ntBASIC4.55□□□□□ -1.68
RB1P06400 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.55□□□□□ -1.68
RB1P06400 IMMP1LP1-201ENST00000605170 488 ntBASIC4.55□□□□□ -1.68
RB1P06400 OR6R2P-201ENST00000609216 300 ntBASIC4.55□□□□□ -1.68
RB1P06400 PART1_2.1-201ENST00000612397 250 ntBASIC4.55□□□□□ -1.68
RB1P06400 CR392039.5-201ENST00000623201 510 ntBASIC4.55□□□□□ -1.68
RB1P06400 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RB1P06400 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms