Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
COL1A1P02452 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.03□□□□□ -1.77
COL1A1P02452 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL1A1P02452 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL1A1P02452 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
COL1A1P02452 AL136116.1-201ENST00000403591 381 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 AL136131.1-201ENST00000406079 803 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 AL031121.1-201ENST00000406553 254 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 HMGN1P24-201ENST00000412282 298 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.02□□□□□ -1.77
COL1A1P02452 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.02□□□□□ -1.77
COL1A1P02452 AL353678.1-201ENST00000422735 741 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 AL353705.1-201ENST00000433468 480 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 AL357552.1-201ENST00000445254 415 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 RPS3AP43-201ENST00000479743 781 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 RPL23AP73-201ENST00000492507 471 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 AC080014.1-201ENST00000496877 1201 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.02□□□□□ -1.77
COL1A1P02452 AC018442.3-201ENST00000523025 183 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.02□□□□□ -1.77
COL1A1P02452 MIR4738-201ENST00000579134 87 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 BNIP3P38-201ENST00000601117 544 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.02□□□□□ -1.77
COL1A1P02452 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COL1A1P02452 AC119674.1-212ENST00000641155 993 ntBASIC4.02□□□□□ -1.77
COL1A1P02452 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL1A1P02452 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL1A1P02452 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COL1A1P02452 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL1A1P02452 AC092111.2-201ENST00000611627 1414 ntBASIC4.01□□□□□ -1.77
COL1A1P02452 AF117829.1-206ENST00000621883 3802 ntBASIC4.01□□□□□ -1.77
COL1A1P02452 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL1A1P02452 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
COL1A1P02452 CR383658.2-201ENST00000547576 1525 ntBASIC4.01□□□□□ -1.77
COL1A1P02452 RNU6-249P-201ENST00000363016 102 ntBASIC4.01□□□□□ -1.77
COL1A1P02452 TRGV5P-201ENST00000419915 354 ntBASIC4.01□□□□□ -1.77
COL1A1P02452 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.01□□□□□ -1.77
COL1A1P02452 ACTG1P13-201ENST00000486987 1043 ntBASIC4.01□□□□□ -1.77
COL1A1P02452 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.01□□□□□ -1.77
COL1A1P02452 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.01□□□□□ -1.77
COL1A1P02452 AC106785.3-201ENST00000564064 847 ntBASIC4.01□□□□□ -1.77
COL1A1P02452 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.01□□□□□ -1.77
COL1A1P02452 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL1A1P02452 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.01□□□□□ -1.77
COL1A1P02452 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4□□□□□ -1.77
COL1A1P02452 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
COL1A1P02452 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL1A1P02452 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
COL1A1P02452 HMGB3P18-201ENST00000406327 590 ntBASIC4□□□□□ -1.77
COL1A1P02452 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4□□□□□ -1.77
COL1A1P02452 AC002524.1-201ENST00000411687 547 ntBASIC4□□□□□ -1.77
COL1A1P02452 RNF19BPX-201ENST00000426224 625 ntBASIC4□□□□□ -1.77
COL1A1P02452 RPL23AP82-202ENST00000427528 469 ntBASIC4□□□□□ -1.77
COL1A1P02452 MTCO3P20-201ENST00000454926 688 ntBASIC4□□□□□ -1.77
COL1A1P02452 CENPBD1P1-201ENST00000464061 469 ntBASIC4□□□□□ -1.77
COL1A1P02452 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4□□□□□ -1.77
COL1A1P02452 AC096576.1-201ENST00000489014 359 ntBASIC4□□□□□ -1.77
COL1A1P02452 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL1A1P02452 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4□□□□□ -1.77
COL1A1P02452 RNU6-1334P-201ENST00000516032 105 ntBASIC4□□□□□ -1.77
COL1A1P02452 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4□□□□□ -1.77
COL1A1P02452 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4□□□□□ -1.77
COL1A1P02452 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4□□□□□ -1.77
COL1A1P02452 AC006386.2-201ENST00000624491 75 ntBASIC4□□□□□ -1.77
COL1A1P02452 AC012005.1-201ENST00000624575 75 ntBASIC4□□□□□ -1.77
COL1A1P02452 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4□□□□□ -1.77
COL1A1P02452 MTND5P12-201ENST00000502851 1449 ntBASIC4□□□□□ -1.77
COL1A1P02452 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
COL1A1P02452 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.99□□□□□ -1.77
COL1A1P02452 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.99□□□□□ -1.77
COL1A1P02452 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.99□□□□□ -1.77
COL1A1P02452 AC091544.1-201ENST00000484702 348 ntBASIC3.99□□□□□ -1.77
COL1A1P02452 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.99□□□□□ -1.77
COL1A1P02452 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.99□□□□□ -1.77
COL1A1P02452 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL1A1P02452 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.99□□□□□ -1.77
COL1A1P02452 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.99□□□□□ -1.77
COL1A1P02452 AL451007.1-201ENST00000595491 289 ntBASIC3.99□□□□□ -1.77
COL1A1P02452 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.99□□□□□ -1.77
COL1A1P02452 AL162713.1-201ENST00000604480 262 ntBASIC3.99□□□□□ -1.77
COL1A1P02452 AC138932.5-201ENST00000617759 563 ntBASIC3.99□□□□□ -1.77
COL1A1P02452 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.99□□□□□ -1.77
COL1A1P02452 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL1A1P02452 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.99□□□□□ -1.77
COL1A1P02452 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL1A1P02452 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL1A1P02452 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.98□□□□□ -1.77
COL1A1P02452 SNORA54-201ENST00000384281 123 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 AC107083.1-201ENST00000439643 279 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 AL121877.1-201ENST00000453704 622 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 AC113430.1-201ENST00000506872 718 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.98□□□□□ -1.77
COL1A1P02452 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.98□□□□□ -1.77
COL1A1P02452 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.98□□□□□ -1.77
COL1A1P02452 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL1A1P02452 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.98□□□□□ -1.77
COL1A1P02452 MIR2682-201ENST00000580305 110 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 RNVU1-4-201ENST00000612985 164 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms