Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.7□□□□□ -1.82
CLDN9O95484 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN9O95484 AL161637.1-201ENST00000622380 412 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 AC083865.1-201ENST00000636634 831 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN9O95484 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.7□□□□□ -1.82
CLDN9O95484 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN9O95484 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLDN9O95484 AL627171.1-201ENST00000618845 1308 ntBASIC3.7□□□□□ -1.82
CLDN9O95484 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN9O95484 OR52E6-202ENST00000379946 954 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 ATP5F1P4-201ENST00000397288 746 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN9O95484 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 PNRC2P1-201ENST00000423940 420 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 AC005189.1-201ENST00000431286 310 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN9O95484 Z74696.2-201ENST00000436514 498 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN9O95484 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN9O95484 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN9O95484 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN9O95484 AL162151.2-201ENST00000448875 158 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 AC012170.1-201ENST00000495139 359 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN9O95484 AC005351.1-201ENST00000511152 786 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 AC008494.2-201ENST00000514544 370 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 RN7SKP21-201ENST00000516503 220 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN9O95484 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN9O95484 AC084824.1-201ENST00000550917 1005 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN9O95484 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN9O95484 AL133457.1-201ENST00000564251 987 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 AC007224.1-201ENST00000564410 144 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.69□□□□□ -1.82
CLDN9O95484 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.69□□□□□ -1.82
CLDN9O95484 AC015726.1-201ENST00000602353 681 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN9O95484 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.69□□□□□ -1.82
CLDN9O95484 AF001550.2-201ENST00000636643 217 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.69□□□□□ -1.82
CLDN9O95484 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 AC119744.1-201ENST00000454746 1715 ntBASIC3.69□□□□□ -1.82
CLDN9O95484 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLDN9O95484 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CLDN9O95484 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLDN9O95484 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN9O95484 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN9O95484 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CLDN9O95484 AC025125.1-201ENST00000624743 1922 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CLDN9O95484 FAM35DP-201ENST00000323387 2712 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN9O95484 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN9O95484 MIR372-201ENST00000362225 67 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 RNU1-18P-201ENST00000363062 164 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 RNU6-1293P-201ENST00000384077 107 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 MIR153-1-201ENST00000384914 90 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CLDN9O95484 ZNF602P-201ENST00000405929 924 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 UBE2V1P15-201ENST00000407776 448 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 AMD1P2-201ENST00000412936 992 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 RPL31P45-201ENST00000419532 356 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN9O95484 HIGD1AP12-201ENST00000427832 281 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 RPL37P1-201ENST00000432310 284 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 RPS26P40-201ENST00000435209 294 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.68□□□□□ -1.82
CLDN9O95484 CYCSP53-201ENST00000455540 265 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 SNORD108-201ENST00000459332 71 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 NPM1P17-201ENST00000479221 602 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN9O95484 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN9O95484 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN9O95484 FTH1P21-201ENST00000512179 511 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN9O95484 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN9O95484 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN9O95484 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN9O95484 CBX3P5-201ENST00000552017 521 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN9O95484 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN9O95484 LLPHP1-201ENST00000603571 367 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.68□□□□□ -1.82
CLDN9O95484 AC105429.2-201ENST00000610567 517 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN9O95484 MIR6864-201ENST00000617935 70 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 RNU6-156P-201ENST00000621869 107 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN9O95484 AC006504.1-201ENST00000562493 3666 ntBASIC3.68□□□□□ -1.82
CLDN9O95484 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLDN9O95484 FAM91A3P-201ENST00000456826 2544 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms