Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RPL7P26-201ENST00000333817 754 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 SNORD115-48-201ENST00000364764 76 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 RNU6-356P-201ENST00000384140 107 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 RNU6-171P-201ENST00000384354 107 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 RPL21P3-201ENST00000395517 478 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
UPK1BO75841 AL353692.2-201ENST00000407054 335 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 SNORA11.3-201ENST00000408471 128 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 TPT1P2-201ENST00000413105 503 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 MTND4P22-201ENST00000413116 1169 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.13□□□□□ -1.91
UPK1BO75841 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.13□□□□□ -1.91
UPK1BO75841 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.13□□□□□ -1.91
UPK1BO75841 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.13□□□□□ -1.91
UPK1BO75841 TRIM60P13-201ENST00000432350 1283 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 ZNF965P-201ENST00000432501 817 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 OR2B8P-201ENST00000432841 938 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 CKS1BP5-201ENST00000434172 273 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.13□□□□□ -1.91
UPK1BO75841 BX276092.4-201ENST00000452056 248 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.13□□□□□ -1.91
UPK1BO75841 AC009963.2-201ENST00000453431 138 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 TVP23BP2-201ENST00000455082 615 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 AC146507.2-201ENST00000460608 476 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 AC104689.1-201ENST00000473356 768 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 AC078817.1-201ENST00000492623 435 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 AC093278.1-201ENST00000494700 600 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.13□□□□□ -1.91
UPK1BO75841 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.13□□□□□ -1.91
UPK1BO75841 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.13□□□□□ -1.91
UPK1BO75841 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 SNORA48.9-201ENST00000516419 162 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.13□□□□□ -1.91
UPK1BO75841 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.13□□□□□ -1.91
UPK1BO75841 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.13□□□□□ -1.91
UPK1BO75841 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.13□□□□□ -1.91
UPK1BO75841 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 HMGN2P28-201ENST00000606102 262 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 AC090948.1-201ENST00000607464 549 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.13□□□□□ -1.91
UPK1BO75841 AL049539.1-201ENST00000611964 459 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 SNORA11.6-201ENST00000619030 128 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 XIST_intron.1-201ENST00000619444 68 ntBASIC3.13□□□□□ -1.91
UPK1BO75841 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UPK1BO75841 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.13□□□□□ -1.91
UPK1BO75841 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1BO75841 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1BO75841 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.12□□□□□ -1.91
UPK1BO75841 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.12□□□□□ -1.91
UPK1BO75841 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UPK1BO75841 RN7SKP15-201ENST00000364742 309 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 RNA5SP366-201ENST00000365454 123 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1BO75841 U3.25-201ENST00000391209 220 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 HMGB1P10-201ENST00000395823 563 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 TAF9BP2-201ENST00000400856 499 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 RNU2-17P-201ENST00000410290 190 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.12□□□□□ -1.91
UPK1BO75841 AC006960.1-201ENST00000419980 153 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1BO75841 AC241520.1-201ENST00000422654 1099 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 RPEP3-201ENST00000425462 676 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1BO75841 OR51AB1P-201ENST00000429046 620 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 MTND4LP14-201ENST00000429447 288 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 MTND4LP7-201ENST00000431728 294 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.12□□□□□ -1.91
UPK1BO75841 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1BO75841 EIF2S2P2-201ENST00000447161 982 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1BO75841 AC073522.1-201ENST00000483312 377 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 RPL5P23-201ENST00000496040 868 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 RPL7L1P13-201ENST00000511702 739 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC093755.1-201ENST00000512950 1023 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.12□□□□□ -1.91
UPK1BO75841 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 RNU4-60P-201ENST00000517239 135 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC010476.1-201ENST00000519111 851 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.12□□□□□ -1.91
UPK1BO75841 IGHV3-76-201ENST00000522465 295 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.12□□□□□ -1.91
UPK1BO75841 OR8L1P-201ENST00000534005 955 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC023161.2-201ENST00000551218 780 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1BO75841 OR4H12P-201ENST00000556269 907 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1BO75841 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
UPK1BO75841 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
UPK1BO75841 AC015849.2-201ENST00000605738 409 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 RNA5SP108-201ENST00000605921 117 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC112503.1-201ENST00000608436 391 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AL359535.1-201ENST00000612100 1087 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms