Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AL451139.1-201ENST00000434718 346 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.96□□□□□ -1.3
HOXA2O43364 RPS26P56-201ENST00000444468 240 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 AC097463.1-201ENST00000447288 481 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 AC011225.1-201ENST00000457751 369 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 RPL12P30-201ENST00000488389 499 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 AC022206.1-201ENST00000495947 347 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 SNX18P24-201ENST00000505249 671 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.96□□□□□ -1.3
HOXA2O43364 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXA2O43364 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.96□□□□□ -1.3
HOXA2O43364 TPRX1P1-201ENST00000557620 319 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.96□□□□□ -1.3
HOXA2O43364 AC073046.2-201ENST00000604756 527 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 AP001486.3-201ENST00000615334 372 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.96□□□□□ -1.3
HOXA2O43364 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.96□□□□□ -1.3
HOXA2O43364 CR392039.4-201ENST00000624968 501 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.96□□□□□ -1.3
HOXA2O43364 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
HOXA2O43364 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
HOXA2O43364 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
HOXA2O43364 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.96□□□□□ -1.3
HOXA2O43364 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 THAP12P4-201ENST00000528321 2266 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 AC104118.1-201ENST00000607625 1589 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 AL391262.1-201ENST00000556558 1992 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXA2O43364 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 AL139384.2-201ENST00000613809 3590 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXA2O43364 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXA2O43364 RNU6-328P-201ENST00000390887 106 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AL157702.1-201ENST00000398764 426 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 RNU4-25P-201ENST00000410569 230 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXA2O43364 RAC1P6-201ENST00000423911 575 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 PNKDP1-201ENST00000435914 430 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 RPL23AP89-201ENST00000439324 255 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HOXA2O43364 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.95□□□□□ -1.3
HOXA2O43364 GSTA11P-201ENST00000452866 669 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AC021074.2-201ENST00000468434 172 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.95□□□□□ -1.3
HOXA2O43364 ATP5LP5-201ENST00000483050 299 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 LSM3P4-201ENST00000502948 309 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AC087854.1-201ENST00000519706 414 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXA2O43364 GNAI2P1-201ENST00000541815 315 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXA2O43364 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXA2O43364 COX6CP3-201ENST00000580869 223 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.95□□□□□ -1.3
HOXA2O43364 FAM27E2-201ENST00000619668 403 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AC011155.2-201ENST00000623202 216 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AC092608.2-201ENST00000624427 218 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXA2O43364 CASC19-228ENST00000641414 1684 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
HOXA2O43364 MAPK10-383ENST00000642032 3390 ntBASIC6.95□□□□□ -1.3
HOXA2O43364 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
HOXA2O43364 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HOXA2O43364 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXA2O43364 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.95□□□□□ -1.3
HOXA2O43364 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HOXA2O43364 ZNF519P1-201ENST00000449011 1626 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 SAGE3P-201ENST00000619800 1635 ntBASIC6.94□□□□□ -1.3
HOXA2O43364 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.94□□□□□ -1.3
HOXA2O43364 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HOXA2O43364 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms