Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SNORD39.3-201ENST00000584451 71 ntBASIC4.67□□□□□ -1.66
PCDH17O14917 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH17O14917 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDH17O14917 VN1R90P-201ENST00000595717 726 ntBASIC4.67□□□□□ -1.66
PCDH17O14917 VN1R92P-201ENST00000598511 928 ntBASIC4.67□□□□□ -1.66
PCDH17O14917 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH17O14917 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDH17O14917 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDH17O14917 AC117529.2-201ENST00000512159 2068 ntBASIC4.67□□□□□ -1.66
PCDH17O14917 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH17O14917 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH17O14917 ERCC6-202ENST00000374127 1782 ntBASIC4.67□□□□□ -1.66
PCDH17O14917 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH17O14917 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDH17O14917 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 IRF5P1-201ENST00000504852 2164 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH17O14917 RNU6-657P-201ENST00000383904 107 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 SSXP10-201ENST00000402595 565 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AL450338.1-201ENST00000407987 512 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AC114755.2-201ENST00000413520 361 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 TMBIM7P-201ENST00000418074 855 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 LINC00993-201ENST00000420453 540 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 RPL36AP10-201ENST00000421785 322 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AL590103.1-201ENST00000434488 307 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 RHOT1P3-201ENST00000436571 331 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 MTND4P6-201ENST00000438297 472 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH17O14917 AL357520.1-201ENST00000441557 453 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH17O14917 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH17O14917 TCEA1P1-201ENST00000449716 880 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AC097262.1-201ENST00000452559 548 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 TRBV26-201ENST00000456572 344 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDH17O14917 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH17O14917 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.66□□□□□ -1.66
PCDH17O14917 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH17O14917 ENPP7P9-201ENST00000514456 627 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDH17O14917 RNA5SP216-201ENST00000516111 123 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 RNY4P37-201ENST00000516225 96 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH17O14917 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.66□□□□□ -1.66
PCDH17O14917 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH17O14917 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.66□□□□□ -1.66
PCDH17O14917 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDH17O14917 AGGF1P8-201ENST00000562979 1000 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDH17O14917 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH17O14917 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AL031320.1-201ENST00000604177 357 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 AL161616.1-201ENST00000611867 286 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH17O14917 AF246928.1-201ENST00000623768 87 ntBASIC4.66□□□□□ -1.66
PCDH17O14917 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH17O14917 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PCDH17O14917 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDH17O14917 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDH17O14917 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDH17O14917 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PCDH17O14917 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH17O14917 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH17O14917 AC099654.2-201ENST00000433031 1980 ntBASIC4.65□□□□□ -1.66
PCDH17O14917 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.65□□□□□ -1.66
PCDH17O14917 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PCDH17O14917 AC006971.1-201ENST00000407916 4486 ntBASIC4.65□□□□□ -1.66
PCDH17O14917 AC026951.1-201ENST00000559530 2459 ntBASIC4.65□□□□□ -1.66
PCDH17O14917 NEAT1-202ENST00000501122 22743 ntBASIC4.65□□□□□ -1.66
PCDH17O14917 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PCDH17O14917 RPL23AP29-201ENST00000397284 453 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 ATP5F1P4-201ENST00000397288 746 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 MIR1302-8-201ENST00000408342 128 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 AC069218.2-201ENST00000411665 344 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH17O14917 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.65□□□□□ -1.67
PCDH17O14917 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH17O14917 QRSL1P2-201ENST00000418582 964 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH17O14917 AC073335.1-201ENST00000427776 363 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH17O14917 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.65□□□□□ -1.67
PCDH17O14917 AC011753.3-201ENST00000443436 406 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 AC022795.1-201ENST00000473808 480 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 MTATP6P22-201ENST00000507369 598 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.65□□□□□ -1.67
PCDH17O14917 BTF3P13-201ENST00000513224 490 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 RNU6-583P-201ENST00000516012 92 ntBASIC4.65□□□□□ -1.67
PCDH17O14917 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.65□□□□□ -1.67
PCDH17O14917 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms