Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC241520.1-201ENST00000422654 1099 ntBASIC4.32□□□□□ -1.72
O00370 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.32□□□□□ -1.72
O00370 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.32□□□□□ -1.72
O00370 AL356535.1-201ENST00000440335 398 ntBASIC4.32□□□□□ -1.72
O00370 RPS4XP4-201ENST00000443195 763 ntBASIC4.32□□□□□ -1.72
O00370 YWHAQP9-201ENST00000445891 512 ntBASIC4.32□□□□□ -1.72
O00370 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.32□□□□□ -1.72
O00370 RPL29P14-201ENST00000495837 428 ntBASIC4.32□□□□□ -1.72
O00370 HMGB1P21-201ENST00000502313 581 ntBASIC4.32□□□□□ -1.72
O00370 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.32□□□□□ -1.72
O00370 MIR2114-201ENST00000516645 80 ntBASIC4.32□□□□□ -1.72
O00370 RN7SKP82-201ENST00000516786 223 ntBASIC4.32□□□□□ -1.72
O00370 HMGB1P1-201ENST00000522557 636 ntBASIC4.32□□□□□ -1.72
O00370 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.32□□□□□ -1.72
O00370 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.32□□□□□ -1.72
O00370 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
O00370 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.32□□□□□ -1.72
O00370 AP001180.3-201ENST00000582221 145 ntBASIC4.32□□□□□ -1.72
O00370 AC012417.1-201ENST00000582307 1039 ntBASIC4.32□□□□□ -1.72
O00370 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.32□□□□□ -1.72
O00370 BNIP3P40-201ENST00000596017 556 ntBASIC4.32□□□□□ -1.72
O00370 AC124016.2-201ENST00000610058 665 ntBASIC4.32□□□□□ -1.72
O00370 MIR6867-201ENST00000610636 67 ntBASIC4.32□□□□□ -1.72
O00370 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
O00370 AC006927.2-201ENST00000639256 389 ntBASIC4.32□□□□□ -1.72
O00370 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.32□□□□□ -1.72
O00370 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.32□□□□□ -1.72
O00370 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
O00370 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
O00370 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
O00370 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
O00370 METTL21EP-201ENST00000298105 713 ntBASIC4.31□□□□□ -1.72
O00370 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.31□□□□□ -1.72
O00370 SNORA60-201ENST00000362396 134 ntBASIC4.31□□□□□ -1.72
O00370 RNA5SP391-201ENST00000363456 119 ntBASIC4.31□□□□□ -1.72
O00370 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.31□□□□□ -1.72
O00370 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.31□□□□□ -1.72
O00370 HMGB3P31-201ENST00000413333 595 ntBASIC4.31□□□□□ -1.72
O00370 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
O00370 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.31□□□□□ -1.72
O00370 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.31□□□□□ -1.72
O00370 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
O00370 AC115285.1-201ENST00000424879 736 ntBASIC4.31□□□□□ -1.72
O00370 USP12PY-201ENST00000427677 1064 ntBASIC4.31□□□□□ -1.72
O00370 ELOCP6-201ENST00000429066 328 ntBASIC4.31□□□□□ -1.72
O00370 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.31□□□□□ -1.72
O00370 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.31□□□□□ -1.72
O00370 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.31□□□□□ -1.72
O00370 HSFY3P-201ENST00000444242 1191 ntBASIC4.31□□□□□ -1.72
O00370 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.31□□□□□ -1.72
O00370 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.31□□□□□ -1.72
O00370 ELOCP12-201ENST00000458706 328 ntBASIC4.31□□□□□ -1.72
O00370 TRBV8-2-201ENST00000475637 270 ntBASIC4.31□□□□□ -1.72
O00370 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.31□□□□□ -1.72
O00370 AC012170.1-201ENST00000495139 359 ntBASIC4.31□□□□□ -1.72
O00370 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.31□□□□□ -1.72
O00370 HMGB1P23-201ENST00000518743 568 ntBASIC4.31□□□□□ -1.72
O00370 PARP1P2-201ENST00000556806 195 ntBASIC4.31□□□□□ -1.72
O00370 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.31□□□□□ -1.72
O00370 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.31□□□□□ -1.72
O00370 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.31□□□□□ -1.72
O00370 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.31□□□□□ -1.72
O00370 AC115621.1-201ENST00000604653 858 ntBASIC4.31□□□□□ -1.72
O00370 AC096586.1-201ENST00000610267 561 ntBASIC4.31□□□□□ -1.72
O00370 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.31□□□□□ -1.72
O00370 AC093875.1-201ENST00000623688 504 ntBASIC4.31□□□□□ -1.72
O00370 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.31□□□□□ -1.72
O00370 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
O00370 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
O00370 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
O00370 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.31□□□□□ -1.72
O00370 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
O00370 BDP1P-201ENST00000582658 1990 ntBASIC4.31□□□□□ -1.72
O00370 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.31□□□□□ -1.72
O00370 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
O00370 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
O00370 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
O00370 SNORD35B-201ENST00000363660 87 ntBASIC4.3□□□□□ -1.72
O00370 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.3□□□□□ -1.72
O00370 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
O00370 MIR122-201ENST00000385044 85 ntBASIC4.3□□□□□ -1.72
O00370 HNRNPDP2-201ENST00000406475 478 ntBASIC4.3□□□□□ -1.72
O00370 AC114814.2-201ENST00000419195 485 ntBASIC4.3□□□□□ -1.72
O00370 AC073310.1-201ENST00000423226 1033 ntBASIC4.3□□□□□ -1.72
O00370 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.3□□□□□ -1.72
O00370 MTCO1P54-201ENST00000430139 712 ntBASIC4.3□□□□□ -1.72
O00370 AC011742.1-201ENST00000431448 434 ntBASIC4.3□□□□□ -1.72
O00370 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.3□□□□□ -1.72
O00370 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
O00370 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.3□□□□□ -1.72
O00370 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.3□□□□□ -1.72
O00370 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.3□□□□□ -1.72
O00370 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.3□□□□□ -1.72
O00370 RPS7P7-201ENST00000463499 571 ntBASIC4.3□□□□□ -1.72
O00370 AC068587.1-201ENST00000483613 781 ntBASIC4.3□□□□□ -1.72
O00370 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.3□□□□□ -1.72
O00370 HMGB1P38-201ENST00000490557 577 ntBASIC4.3□□□□□ -1.72
O00370 TPT1P8-201ENST00000510120 555 ntBASIC4.3□□□□□ -1.72
O00370 RNU6-415P-201ENST00000516252 97 ntBASIC4.3□□□□□ -1.72
O00370 IGKV2-38-201ENST00000517443 247 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms