Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1AO00322 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1AO00322 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1AO00322 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1AO00322 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
UPK1AO00322 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1AO00322 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1AO00322 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1AO00322 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1AO00322 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1AO00322 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1AO00322 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
UPK1AO00322 RNA5SP51-201ENST00000364750 119 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 SNORD3H-201ENST00000384486 214 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 RNU6-244P-201ENST00000391028 104 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 HMGB3P18-201ENST00000406327 590 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 RPL31P52-201ENST00000407532 367 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1AO00322 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1AO00322 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
UPK1AO00322 GTF2IP23-201ENST00000423746 351 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1AO00322 NOTCH2P1-201ENST00000443481 624 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.37□□□□□ -1.87
UPK1AO00322 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1AO00322 AC087312.1-201ENST00000471411 480 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
UPK1AO00322 RNU6-579P-201ENST00000516879 102 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 RANP9-201ENST00000519957 271 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1AO00322 OR4C2P-201ENST00000530855 1064 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1AO00322 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.37□□□□□ -1.87
UPK1AO00322 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1AO00322 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.37□□□□□ -1.87
UPK1AO00322 BNIP3P38-201ENST00000601117 544 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 AL049844.2-201ENST00000604280 628 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 AC006077.1-201ENST00000604746 343 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.37□□□□□ -1.87
UPK1AO00322 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1AO00322 AC000123.2-201ENST00000623124 461 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 AC119674.1-207ENST00000641355 633 ntBASIC3.37□□□□□ -1.87
UPK1AO00322 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1AO00322 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1AO00322 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.37□□□□□ -1.87
UPK1AO00322 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.37□□□□□ -1.87
UPK1AO00322 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPK1AO00322 AL592437.2-201ENST00000421655 2434 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
UPK1AO00322 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1AO00322 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
UPK1AO00322 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1AO00322 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UPK1AO00322 U3.39-201ENST00000408569 239 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 RN7SKP159-201ENST00000410657 292 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 MTND4P22-201ENST00000413116 1169 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 AL355994.1-201ENST00000424379 260 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 AC017083.1-201ENST00000428093 483 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 AC010683.1-201ENST00000473673 378 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.36□□□□□ -1.87
UPK1AO00322 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.36□□□□□ -1.87
UPK1AO00322 AC026333.2-201ENST00000542164 106 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.36□□□□□ -1.87
UPK1AO00322 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.36□□□□□ -1.87
UPK1AO00322 AC011492.1-201ENST00000600023 315 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 AL391497.1-201ENST00000608671 547 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1AO00322 AL731566.2-201ENST00000618971 317 ntBASIC3.36□□□□□ -1.87
UPK1AO00322 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UPK1AO00322 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
UPK1AO00322 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPK1AO00322 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
UPK1AO00322 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UPK1AO00322 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UPK1AO00322 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1AO00322 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
UPK1AO00322 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1AO00322 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.35□□□□□ -1.87
UPK1AO00322 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
UPK1AO00322 AC017002.4-201ENST00000604721 1525 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 MTCO1P14-201ENST00000441695 1559 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 RNU6-31P-201ENST00000384388 108 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 MIR7-1-201ENST00000384871 110 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 RNU6-328P-201ENST00000390887 106 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AL035423.1-201ENST00000420331 213 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1AO00322 AL606490.7-201ENST00000433136 191 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1AO00322 AC023512.1-201ENST00000444513 499 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1AO00322 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPK1AO00322 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.35□□□□□ -1.87
UPK1AO00322 HMGB3P21-201ENST00000452483 547 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AC011037.1-201ENST00000483964 558 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 AC091917.2-201ENST00000505002 744 ntBASIC3.35□□□□□ -1.87
UPK1AO00322 MTND4LP31-201ENST00000514859 294 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms