Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 AL139811.1-201ENST00000424779 2299 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 ZNF33CP-201ENST00000432492 2030 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 RNU1-85P-201ENST00000364127 164 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 NRBF2P2-201ENST00000413087 861 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC188H7C350 LIPT1P1-201ENST00000415870 1186 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC188H7C350 RPEP3-201ENST00000425462 676 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 UBE2V1P1-201ENST00000430836 445 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC188H7C350 AC006011.1-201ENST00000442758 349 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 RAB11AP1-201ENST00000442978 646 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC188H7C350 BX276092.4-201ENST00000452056 248 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC188H7C350 AC244505.3-201ENST00000454598 187 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC188H7C350 PRDX3P4-201ENST00000470828 747 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC188H7C350 AC146944.2-203ENST00000502493 354 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC069306.1-201ENST00000507006 843 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 KRT19P6-201ENST00000510983 209 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC109471.1-201ENST00000511631 612 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC093755.1-201ENST00000512950 1023 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC139495.1-202ENST00000513164 354 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 RNA5SP49-201ENST00000516450 115 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 RN7SKP277-201ENST00000516895 283 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 snoZ278.1-201ENST00000517059 112 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC188H7C350 MTND5P21-201ENST00000531961 522 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 TRAV8-5-201ENST00000537369 341 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC188H7C350 AC004217.3-201ENST00000551552 878 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 AC141257.3-201ENST00000572906 215 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AP001180.3-201ENST00000582221 145 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC090948.1-201ENST00000607464 549 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AP004247.3-201ENST00000608682 624 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AF129408.1-201ENST00000608767 431 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC188H7C350 AC093673.2-201ENST00000609674 331 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 MIR6780A-201ENST00000615089 68 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC188H7C350 AC004808.1-201ENST00000627671 721 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 MIR4496-201ENST00000635896 61 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 AC010300.1-201ENST00000600671 5134 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC188H7C350 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC188H7C350 Z82217.1-201ENST00000625157 8149 ntBASIC4.23□□□□□ -1.73
CCDC188H7C350 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CCDC188H7C350 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC188H7C350 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC188H7C350 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
CCDC188H7C350 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC188H7C350 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC188H7C350 AC116667.1-201ENST00000604855 2072 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC188H7C350 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC188H7C350 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC188H7C350 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCDC188H7C350 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC188H7C350 MIR153-1-201ENST00000384914 90 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 MIR129-1-201ENST00000384972 72 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 RNU6-1176P-201ENST00000390955 107 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC188H7C350 AL358472.1-201ENST00000431295 329 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC188H7C350 RPL7P59-201ENST00000447700 943 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 AL513533.1-201ENST00000453728 415 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 FCF1P6-201ENST00000456841 595 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC188H7C350 RPL7P1-201ENST00000468161 747 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 RPL7P9-201ENST00000468715 747 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 RN7SL354P-201ENST00000469282 294 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC188H7C350 AC087879.1-201ENST00000474343 374 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 AF213884.1-201ENST00000488102 463 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC188H7C350 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC188H7C350 IGLVIV-65-201ENST00000517313 360 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 AC010376.1-201ENST00000522101 334 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 OR8G5-201ENST00000524943 1041 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 MTND2P26-201ENST00000528255 1029 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC188H7C350 CR383656.6-201ENST00000550518 394 ntBASIC4.22□□□□□ -1.73
CCDC188H7C350 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC188H7C350 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CCDC188H7C350 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC188H7C350 RPAP2P1-201ENST00000603626 1168 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms