Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC015795.1-201ENST00000513669 327 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-1261P-201ENST00000517194 104 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC027309.2-201ENST00000520566 192 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 TRAV15-201ENST00000556680 249 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC124068.1-201ENST00000563131 678 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AP005136.1-201ENST00000579765 429 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC008687.2-201ENST00000597865 520 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AL358072.1-201ENST00000604156 575 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC245008.1-201ENST00000608123 476 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 MAPK10-304ENST00000641341 3984 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 PHKBP1-201ENST00000450951 1951 ntBASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TCRBV7S3A2A0A539 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC009229.4-201ENST00000623854 1947 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC090017.1-201ENST00000548612 1779 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RNU1-108P-201ENST00000362556 161 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-251P-201ENST00000363235 104 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-553P-201ENST00000364047 96 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 SNORD116-9-201ENST00000384000 95 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 SNORD116-3-201ENST00000384287 95 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 SNORD116-7-201ENST00000384404 95 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 SNORD116-5-201ENST00000384462 95 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 MIR105-2-201ENST00000385083 81 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 PRRC2CP1-201ENST00000404428 159 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RNU6-603P-201ENST00000411403 107 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC068533.2-201ENST00000411872 306 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC009302.1-201ENST00000417147 390 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 CYCSP10-201ENST00000417973 294 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 MORF4L1P6-201ENST00000418771 268 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AL360081.1-201ENST00000428299 555 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 IFNNP1-201ENST00000429219 553 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 HLA-N-201ENST00000437516 135 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 ISCA1P2-201ENST00000438679 421 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 MTND1P29-201ENST00000448112 647 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AL591363.1-201ENST00000450091 483 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RPS15AP1-201ENST00000457423 391 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC010326.1-201ENST00000462726 602 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RN7SL809P-201ENST00000482040 297 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 KLRA1P-201ENST00000503499 986 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RNA5SP497-201ENST00000516081 97 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 SERPINE4P-201ENST00000554978 281 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 RN7SL690P-201ENST00000582087 240 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC112220.3-201ENST00000605502 502 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC004948.1-201ENST00000609858 672 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC004223.4-201ENST00000612426 332 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC091953.3-201ENST00000623220 236 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AL445523.1-201ENST00000451184 1362 ntBASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TCRBV7S3A2A0A539 AC025125.1-201ENST00000624743 1922 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms