Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.88□□□□□ -1.79
SMIM28A0A1B0GU29 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC018555.1-201ENST00000567548 1980 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC093311.1-201ENST00000506586 2021 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 HSPE1P8-201ENST00000406997 288 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 USP12PY-201ENST00000427677 1064 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC006946.1-201ENST00000429106 328 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 MTCO3P21-201ENST00000430791 643 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 HMGB1P26-201ENST00000452520 628 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 RBMY2UP-201ENST00000453474 324 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 BTF3L4P4-201ENST00000506381 449 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC025768.1-201ENST00000510057 267 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC007458.1-201ENST00000542812 373 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AL671309.1-201ENST00000603750 544 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC006077.1-201ENST00000604746 343 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 KATNBL1P5-201ENST00000605015 517 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AL512506.1-201ENST00000613918 449 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC007656.2-201ENST00000624902 4547 ntBASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SMIM28A0A1B0GU29 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 MTCO1P12-201ENST00000414273 1543 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-252P-201ENST00000363232 107 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-666P-201ENST00000363499 107 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 SNORA70.4-201ENST00000365509 134 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 LAP3P1-201ENST00000403648 294 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AL159987.2-201ENST00000432754 307 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-1218P-201ENST00000458990 108 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 RPL7P49-201ENST00000471402 708 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AC005912.1-201ENST00000495392 255 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AC010627.1-201ENST00000503819 1294 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-1102P-201ENST00000516149 96 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AC092474.3-201ENST00000603022 568 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AC010200.2-201ENST00000605098 235 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AL096803.3-201ENST00000609032 532 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AC084757.4-201ENST00000616350 526 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 uc_338.9-201ENST00000617424 182 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 FRG1DP-201ENST00000635586 771 ntBASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMIM28A0A1B0GU29 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 SNORD46.1-201ENST00000364139 104 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 RNU6-185P-201ENST00000384421 107 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 MIR490-201ENST00000384865 128 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 HMGN2P8-201ENST00000391458 268 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 RN7SKP177-201ENST00000410567 355 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 RPL21P109-201ENST00000422213 475 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 YWHAEP5-201ENST00000431545 765 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 ATP5JP1-201ENST00000431631 322 ntBASIC3.85□□□□□ -1.79
SMIM28A0A1B0GU29 CYCSP35-201ENST00000451978 304 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms